RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 HIBCHQ6NVY1 386 aaPredicted RBP11.39□□□□□ -0.59
SND1-208ENST00000470463 MSANTD2Q6P1R3 559 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 GPRIN1Q7Z2K8 1008 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 PPIL6Q8IXY8 311 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 ZNF276Q8N554 614 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 ZCCHC9Q8N567 271 aaKnown RBP11.39□□□□□ -0.59
SND1-208ENST00000470463 PDZD8Q8NEN9 1154 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 PCDH19Q8TAB3 1148 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 DIS3LQ8TF46 1054 aaKnown RBP11.39□□□□□ -0.59
SND1-208ENST00000470463 UBLCP1Q8WVY7 318 aaPredicted RBP11.39□□□□□ -0.59
SND1-208ENST00000470463 OVCA2Q8WZ82 227 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 TMEM169Q96HH4 297 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 IGSF21Q96ID5 467 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 GDAP1L1Q96MZ0 367 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 TTC25Q96NG3 672 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 HAPLN3Q96S86 360 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 TMEM209Q96SK2 561 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 SH3GL2Q99962 352 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 OSBPL2Q9H1P3 480 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 SMOC2Q9H3U7 446 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
SND1-208ENST00000470463 TMEM30AQ9NV96 361 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 PAK5Q9P286 719 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 MTRRQ9UBK8 725 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 SLC12A6Q9UHW9 1150 aa11.39□□□□□ -0.59
SND1-208ENST00000470463 BRCA2P51587 3418 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 PATJQ8NI35 1801 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 MTMR11A4FU01 709 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 F8W810 466 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 EEF2KO00418 725 aaKnown RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 IRAK2O43187 625 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 UPP2O95045 317 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 EFEMP2O95967 443 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 IFNB1P01574 187 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 IGLV3-25P01717 112 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 SOD2P04179 222 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 MYZAPP0CAP1 466 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 HAPLN1P10915 354 aaPredicted RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 MX2P20592 715 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 YWHAQP27348 245 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 OAS2P29728 719 aaKnown RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 GGCXP38435 758 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 IFFO1Q0D2I5 559 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 GPS1Q13098 491 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 PDK1Q15118 436 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 TRADDQ15628 312 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 SLC45A4Q5BKX6 768 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 RHBDF2Q6PJF5 856 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 KCNT2Q6UVM3 1135 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.38□□□□□ -0.591e-24■■■■■ 28.8
SND1-208ENST00000470463 DENND5BQ6ZUT9 1274 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 BHLHA9Q7RTU4 235 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 RNF168Q8IYW5 571 aaPredicted RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 TDHQ8IZJ6 230 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 CNPY4Q8N129 248 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 CCDC185Q8N715 623 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 PQLC3Q8N755 202 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 RNF34Q969K3 372 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 KCTD15Q96SI1 283 aaPredicted RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 CCDC77Q9BR77 488 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 TMEM121Q9BTD3 319 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 STMN4Q9H169 189 aaPredicted RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 NEUROG2Q9H2A3 272 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 CWH43Q9H720 699 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 PPCSQ9HAB8 311 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 WDR6Q9NNW5 1121 aaKnown RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 IL23AQ9NPF7 189 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.38□□□□□ -0.59
SND1-208ENST00000470463 PIGVQ9NUD9 493 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 MTMR10Q9NXD2 777 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 SPG21Q9NZD8 308 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 CWC15Q9P013 229 aaKnown RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 FNIP2Q9P278 1114 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 PLAAQ9Y263 795 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 ATP8A1Q9Y2Q0 1164 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 COL4A4P53420 1690 aaPredicted RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 PTPRDP23468 1912 aa11.38□□□□□ -0.59
SND1-208ENST00000470463 FNDC1Q4ZHG4 1894 aaPredicted RBP11.38□□□□□ -0.59
SND1-208ENST00000470463 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
SND1-208ENST00000470463 TFE3P19532 575 aaPredicted RBP11.37□□□□□ -0.59
SND1-208ENST00000470463 PPP3CCP48454 512 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 GATMP50440 423 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 TPI1P60174 286 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 WDR5P61964 334 aaKnown RBP11.37□□□□□ -0.59
SND1-208ENST00000470463 NRG1Q02297 640 aaPredicted RBP11.37□□□□□ -0.59
SND1-208ENST00000470463 DSG1Q02413 1049 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 ZNF33AQ06730 810 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 SEMA3BQ13214 749 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 BTG3Q14201 252 aaPredicted RBP11.37□□□□□ -0.59
SND1-208ENST00000470463 PAFAH1B3Q15102 231 aaKnown RBP11.37□□□□□ -0.59
SND1-208ENST00000470463 PSMD5Q16401 504 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 CA9Q16790 459 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 TCTN1Q2MV58 587 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 OTUD1Q5VV17 481 aaPredicted RBP11.37□□□□□ -0.59
SND1-208ENST00000470463 HEATR6Q6AI08 1181 aaKnown RBP11.37□□□□□ -0.59
SND1-208ENST00000470463 RFX8Q6ZV50 586 aa11.37□□□□□ -0.59
SND1-208ENST00000470463 HFE2Q6ZVN8 426 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms