RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TAGLN3Q9UI15 199 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 SORCS3Q9UPU3 1222 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 MAP3K6O95382 1288 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 LINGO3P0C6S8 592 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 PGM1P36871 562 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 IGBP1P78318 339 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 NIPAL4Q0D2K0 466 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 LBRQ14739 615 aaKnown RBP14.11□□□□□ -0.15
BRCA1-209ENST00000470026 ZBTB6Q15916 424 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 KCNT2Q6UVM3 1135 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 ACOT1Q86TX2 421 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 CRLF3Q8IUI8 442 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 APLFQ8IW19 511 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-209ENST00000470026 GPC2Q8N158 579 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 NDUFAF2Q8N183 169 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 MICAL1Q8TDZ2 1067 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 SPDL1Q96EA4 605 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 KIF12Q96FN5 646 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 TRIM56Q9BRZ2 755 aaKnown RBP14.11□□□□□ -0.15
BRCA1-209ENST00000470026 C1orf21Q9H246 121 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 ZNF395Q9H8N7 513 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-209ENST00000470026 PCMTD2Q9NV79 361 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 THAP1Q9NVV9 213 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 ZNF212Q9UDV6 495 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 KCNH4Q9UQ05 1017 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 HACD1B0YJ81 288 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 B2RBV5 119 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 VTNP04004 478 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 SERPINA6P08185 405 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 FDFT1P37268 417 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 GRIA1P42261 906 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 AP1B1Q10567 949 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 LAMC2Q13753 1193 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 PPP6R3Q5H9R7 873 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-209ENST00000470026 NCBP2-AS2Q69YL0 99 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 TRIM68Q6AZZ1 485 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 IRGCQ6NXR0 463 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 MAMDC4Q6UXC1 1216 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 RBM15BQ8NDT2 890 aaKnown RBP14.1□□□□□ -0.15
BRCA1-209ENST00000470026 CSPG4P5Q96PW8 444 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 KCTD15Q96SI1 283 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-209ENST00000470026 B3GNT5Q9BYG0 378 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 PRDM16Q9HAZ2 1276 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 EIF2B3Q9NR50 452 aaKnown RBP14.1□□□□□ -0.15
BRCA1-209ENST00000470026 DTLQ9NZJ0 730 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 MORF4L1Q9UBU8 362 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 AKT3Q9Y243 479 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 LRCH1Q9Y2L9 728 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 TRIP11Q15643 1979 aa14.1□□□□□ -0.15
BRCA1-209ENST00000470026 KAT6AQ92794 2004 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 ASB14A6NK59 587 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 SDR42E2A6NKP2 422 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 CAPN9O14815 690 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 TM7SF2O76062 418 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 ZBTB7AO95365 584 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 GRIK3Q13003 919 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 NAB1Q13506 487 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 TUBB3Q13509 450 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 MUM1Q2TAK8 710 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 MROH9Q5TGP6 573 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 MTHFD1LQ6UB35 978 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 LRRC74BQ6ZQY2 392 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 NET1Q7Z628 596 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-209ENST00000470026 ERO1BQ86YB8 467 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 HACE1Q8IYU2 909 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 LRRC52Q8N7C0 313 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 LRRN4Q8WUT4 740 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 MROH8Q9H579 483 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 STN1Q9H668 368 aaKnown RBP14.09□□□□□ -0.15
BRCA1-209ENST00000470026 RCOR3Q9P2K3 495 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-209ENST00000470026 PPARGC1AQ9UBK2 798 aaKnown RBP14.09□□□□□ -0.15
BRCA1-209ENST00000470026 RGS17Q9UGC6 210 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-209ENST00000470026 EMCNQ9ULC0 261 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 AP4E1Q9UPM8 1137 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 MAD1L1Q9Y6D9 718 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 A0A0A0MRY4 1105 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 CYP2C8P10632 490 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 VAV1P15498 845 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 AOC1P19801 751 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 AQP5P55064 265 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 KLC1Q07866 573 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 STX3Q13277 289 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 CCDC6Q16204 474 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 DCAF4L1Q3SXM0 396 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 DNAL1Q4LDG9 190 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 MBLAC2Q68D91 279 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 TAPT1Q6NXT6 567 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 LRRC8BQ6P9F7 803 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 DLK2Q6UY11 383 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 PAXIP1Q6ZW49 1069 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-209ENST00000470026 FBXO27Q8NI29 283 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 DEPDC1BQ8WUY9 529 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 EMID1Q96A84 441 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-209ENST00000470026 SPATA13Q96N96 652 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 PPP1R16BQ96T49 567 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 DHX35Q9H5Z1 703 aaKnown RBP14.09□□□□□ -0.15
BRCA1-209ENST00000470026 FAM49BQ9NUQ9 324 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 DNAJB4Q9UDY4 337 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 SNX9Q9Y5X1 595 aa14.09□□□□□ -0.15
BRCA1-209ENST00000470026 RBM47A0AV96 593 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms