RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 DPYSL4O14531 572 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 ARHGAP6O43182 974 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 ECI2O75521 394 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 TCF3P15923 654 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 PTPN9P43378 593 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 TBX4P57082 545 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 NME3Q13232 169 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 CDO1Q16878 200 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 SLC25A52Q3SY17 297 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 C10orf76Q5T2E6 689 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 DAB2IPQ5VWQ8 1189 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 MTSS1LQ765P7 747 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 ARFGAP1Q8N6T3 406 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 ZNF564Q8TBZ8 553 aaPredicted RBP15.4■□□□□ 0.06
COL9A3-209ENST00000469852 SLC39A13Q96H72 371 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 ZFYVE19Q96K21 471 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 SERPINB11Q96P15 392 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 LACRTQ9GZZ8 138 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 KIF9Q9HAQ2 790 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 C11orf16Q9NQ32 467 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 ANLNQ9NQW6 1124 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 CTTNBP2NLQ9P2B4 639 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 SALL4Q9UJQ4 1053 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 INTUQ9ULD6 942 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 STAP1Q9ULZ2 295 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 HBS1LQ9Y450 684 aaKnown RBP15.4■□□□□ 0.06
COL9A3-209ENST00000469852 ADGRG1Q9Y653 693 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 COL4A3Q01955 1670 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 COL4A2P08572 1712 aa15.4■□□□□ 0.06
COL9A3-209ENST00000469852 I6L893 689 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-209ENST00000469852 ENDOD1O94919 500 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 SDC4P31431 198 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 VAV2P52735 878 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 ZNF143P52747 638 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-209ENST00000469852 HDAC4P56524 1084 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 COG7P83436 770 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 ZC3H12AQ5D1E8 599 aaKnown RBP15.39■□□□□ 0.05
COL9A3-209ENST00000469852 Q6ZNB5 142 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 MFSD6LQ8IWD5 586 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 SLC35G2Q8TBE7 412 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 BPIFB1Q8TDL5 484 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 FAM172AQ8WUF8 416 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 CENPIQ92674 756 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-209ENST00000469852 PGAP3Q96FM1 320 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-209ENST00000469852 LINC00597Q9H2U6 94 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 MRPL47Q9HD33 250 aaKnown RBP15.39■□□□□ 0.05
COL9A3-209ENST00000469852 TMPRSS4Q9NRS4 437 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 OBP2AQ9NY56 170 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 TRIM10Q9UDY6 481 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 XPO7Q9UIA9 1087 aaKnown RBP15.39■□□□□ 0.05
COL9A3-209ENST00000469852 ANAPC7Q9UJX3 599 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 TLR6Q9Y2C9 796 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 WNT6Q9Y6F9 365 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 DUSP10Q9Y6W6 482 aa15.39■□□□□ 0.05
COL9A3-209ENST00000469852 NARSO43776 548 aaKnown RBP15.38■□□□□ 0.05
COL9A3-209ENST00000469852 PSMA2P25787 234 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 CORO1AP31146 461 aaKnown RBP15.38■□□□□ 0.05
COL9A3-209ENST00000469852 DEUP1Q05D60 604 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 FCHO2Q0JRZ9 810 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 NNTQ13423 1086 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 TRIM68Q6AZZ1 485 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 HTR3DQ70Z44 454 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 FAM131BQ86XD5 332 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 BBS7Q8IWZ6 715 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 SLC44A3Q8N4M1 653 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 RFFLQ8WZ73 363 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 PLD4Q96BZ4 506 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 FAM122AQ96E09 287 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 P2RY11Q96G91 374 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 CNPY3Q9BT09 278 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 RRN3Q9NYV6 651 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 AGO1Q9UL18 857 aaKnown RBP15.38■□□□□ 0.05
COL9A3-209ENST00000469852 SH3BP1Q9Y3L3 701 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 TICRRQ7Z2Z1 1910 aa15.38■□□□□ 0.05
COL9A3-209ENST00000469852 E2F8A0AVK6 867 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 PJA2O43164 708 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 MOCS2O96007 188 aaPredicted RBP15.37■□□□□ 0.05
COL9A3-209ENST00000469852 TCF4P15884 667 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 PSMC3P17980 439 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 GBP1P32455 592 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 RDXP35241 583 aaKnown RBP15.37■□□□□ 0.05
COL9A3-209ENST00000469852 CXCR3P49682 368 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 KRT83P78385 493 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 RING1Q06587 406 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 TNK2Q07912 1038 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 NADSYN1Q6IA69 706 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 STRADAQ7RTN6 431 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 DDX42Q86XP3 938 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL9A3-209ENST00000469852 RNF135Q8IUD6 432 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 DENND1CQ8IV53 801 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 FNIP1Q8TF40 1166 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 E2F7Q96AV8 911 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 MAGEB5Q9BZ81 275 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 IGSF9Q9P2J2 1179 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 UVRAGQ9P2Y5 699 aa15.37■□□□□ 0.05
COL9A3-209ENST00000469852 MYOFQ9NZM1 2061 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 GOLGA6L7A0A1B0GV03 622 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 KCNU1A8MYU2 1149 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 PI4K2BG5E9Z4 385 aa15.36■□□□□ 0.05
COL9A3-209ENST00000469852 ARNTLO00327 626 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms