RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 GPR32O75388 356 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 DCTN3O75935 186 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 KRT37O76014 449 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 MGAT1P26572 445 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 SLC8A1P32418 973 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 BST2Q10589 180 aaKnown RBP18.44■□□□□ 0.54
MCF2L-221ENST00000469415 NAA25Q14CX7 972 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 PKDCCQ504Y2 493 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 OLFML2BQ68BL8 750 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 ASRGL1Q7L266 308 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 SPNS2Q8IVW8 549 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 ZNF276Q8N554 614 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 AGR3Q8TD06 166 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 APOPT1Q96IL0 206 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 PTPN18Q99952 460 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 FAM167BQ9BTA0 163 aa18.44■□□□□ 0.54
MCF2L-221ENST00000469415 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.44■□□□□ 0.54
MCF2L-221ENST00000469415 LAMA3Q16787 3333 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 CHADO15335 359 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 SNRPAP09012 282 aaKnown RBP18.43■□□□□ 0.54
MCF2L-221ENST00000469415 DARSP14868 501 aaKnown RBP18.43■□□□□ 0.54
MCF2L-221ENST00000469415 CLNKQ7Z7G1 428 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 COLGALT1Q8NBJ5 622 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 SLC7A14Q8TBB6 771 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 SLC7A6OSQ96CW6 309 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-221ENST00000469415 PGBD4Q96DM1 585 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 MS4A4AQ96JQ5 239 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 LAMA2P24043 3122 aaKnown RBP18.43■□□□□ 0.54
MCF2L-221ENST00000469415 BST1Q10588 318 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 SNX17Q15036 470 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 PID1Q7Z2X4 250 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 ANKRD52Q8NB46 1076 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 MOCOSQ96EN8 888 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 RILPQ96NA2 401 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 DHRS4Q9BTZ2 278 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 ABHD16BQ9H3Z7 469 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 FLRT1Q9NZU1 646 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 KIAA1257Q9ULG3 409 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 PSAT1Q9Y617 370 aa18.43■□□□□ 0.54
MCF2L-221ENST00000469415 FAM72CH0Y354 149 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 LYPLA1O75608 230 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-221ENST00000469415 APOEP02649 317 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 AMHP03971 560 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 GM2AP17900 193 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 KCNA4P22459 653 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 PSMB4P28070 264 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 SLC45A4Q5BKX6 768 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 PPM1JQ5JR12 505 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 FAM72AQ5TYM5 149 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 TTC39BQ5VTQ0 682 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-221ENST00000469415 CES4AQ5XG92 561 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 FAM72DQ6L9T8 149 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 APBB1IPQ7Z5R6 666 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-221ENST00000469415 TLK2Q86UE8 772 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 FAM72BQ86X60 149 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 NUDCD3Q8IVD9 361 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 FAM13CQ8NE31 585 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 AZIN2Q96A70 460 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 MAF1Q9H063 256 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 PPARGC1AQ9UBK2 798 aaKnown RBP18.42■□□□□ 0.54
MCF2L-221ENST00000469415 UBQLN1Q9UMX0 589 aaKnown RBP18.42■□□□□ 0.54
MCF2L-221ENST00000469415 ANK1P16157 1881 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 HAUS5O94927 633 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 ERVK-10P10266 1014 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 BCAT1P54687 386 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 KDSRQ06136 332 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 DCAF4L1Q3SXM0 396 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 ANKRD20A2Q5SQ80 823 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 ANKRD20A1Q5TYW2 823 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 NCBP2-AS2Q69YL0 99 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 SLC9A4Q6AI14 798 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 KDELC2Q7Z4H8 507 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 PLEKHH3Q7Z736 793 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 DTX3LQ8TDB6 740 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 HTR3CQ8WXA8 447 aa18.42■□□□□ 0.54
MCF2L-221ENST00000469415 TGM2P21980 687 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 CLNS1AP54105 237 aaKnown RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 RPL10AP62906 217 aaKnown RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 ZNF534Q76KX8 674 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 CDKL3Q8IVW4 592 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 SIX6OS1Q8N1H7 587 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 FRMD8P1Q9BZ68 369 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 PRDM12Q9H4Q4 367 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 ZNF358Q9NW07 568 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 CASTOR2A6NHX0 329 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 RNF103O00237 685 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 NRP1O14786 923 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 ENO1P06733 434 aaKnown RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 TPH1P17752 444 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 TAF6P49848 677 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 ALDH18A1P54886 795 aaKnown RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 MFSD10Q14728 455 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 LDLRAD1Q5T700 205 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 USP50Q70EL3 339 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 IFNLR1Q8IU57 520 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 B3GALNT2Q8NCR0 500 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 SHCBP1Q8NEM2 672 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 USP33Q8TEY7 942 aa18.41■□□□□ 0.54
MCF2L-221ENST00000469415 TFB1MQ8WVM0 346 aaKnown RBP18.41■□□□□ 0.54
MCF2L-221ENST00000469415 SIGLEC10Q96LC7 697 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms