RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 ACADMP11310 421 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 LAMP2P13473 410 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CYP2F1P24903 491 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 RASSF2P50749 326 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 GALCP54803 685 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 NRLP54845 237 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 IL9RQ01113 521 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ADCY2Q08462 1091 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 PPP2R5EQ16537 467 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 TRPM8Q7Z2W7 1104 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 LNX1Q8TBB1 728 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 NKD2Q969F2 451 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ZNF653Q96CK0 615 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CDK5RAP1Q96SZ6 601 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 TSC22D3Q99576 134 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 TRIM4Q9C037 500 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CIPCQ9C0C6 399 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 EPHX3Q9H6B9 360 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 TBC1D17Q9HA65 648 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 KBTBD4Q9NVX7 518 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 TBC1D14Q9P2M4 693 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 PLA2G4CQ9UP65 541 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 IRAK3Q9Y616 596 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 PIAS3Q9Y6X2 628 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 SPTBN2O15020 2390 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 SPAG7O75391 227 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 RAD23BP54727 409 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 MAP3K7CLP57077 242 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CYP4F8P98187 520 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ZP2Q05996 745 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 DSC1Q08554 894 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ITPRIPL2Q3MIP1 535 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 KIAA0319Q5VV43 1072 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 GPR65Q8IYL9 337 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 FUKQ8N0W3 1084 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 DAW1Q8N136 415 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 GLIS3Q8NEA6 775 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 DDI1Q8WTU0 396 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 C1orf54Q8WWF1 131 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CAVIN3Q969G5 261 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 RUNDC3BQ96NL0 473 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 PPP1R10Q96QC0 940 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CLSTN3Q9BQT9 956 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 OSBPL1AQ9BXW6 950 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 TJP2Q9UDY2 1190 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 DCTN4Q9UJW0 460 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ANAPC5Q9UJX4 755 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 NUMBLQ9Y6R0 609 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 PI4K2BG5E9Z4 385 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 SOAT2O75908 522 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 LUC7L3O95232 432 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 MOCS2O96007 188 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 APODP05090 189 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 XPAP23025 273 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 COG7P83436 770 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CSTF1Q05048 431 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 KCNA1Q09470 495 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 PSMD6Q15008 389 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 STILQ15468 1287 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ACCSLQ4AC99 568 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 SLC44A4Q53GD3 710 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 IL31Q6EBC2 164 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 OR6B2Q6IFH4 312 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 LONP2Q86WA8 852 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 TCEAL8Q8IYN2 117 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 RYBPQ8N488 228 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 KIAA0895Q8NCT3 520 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CFAP61Q8NHU2 1237 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 FAM3CQ92520 227 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 EDAQ92838 391 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 MYLPFQ96A32 169 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 C8orf33Q9H7E9 229 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CYP3A43Q9HB55 503 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ZNF148Q9UQR1 794 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 A0A1W2PQJ5 194 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 HEPACAM2A8MVW5 462 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 H0Y858 1186 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 M0QYV0 167 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 OPHN1O60890 802 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 NDUFS2O75306 463 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 LCP1P13796 627 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 UCHL3P15374 230 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CA4P22748 312 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 DNAJB1P25685 340 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 DDX6P26196 483 aaKnown RBP eCLIP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ATP5C1P36542 298 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CLCN4P51793 760 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 POU5F1Q01860 360 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ZNF844Q08AG5 666 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 BYSLQ13895 437 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 RCN2Q14257 317 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 DRAP1Q14919 205 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ANKRD20A8PQ5CZ79 823 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 CCDC137Q6PK04 289 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ARHGEF18Q6ZSZ5 1173 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 APTXQ7Z2E3 356 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 NUP93Q8N1F7 819 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 ZNF507Q8TCN5 953 aa6.22□□□□□ -1.41
SHQ1-205ENST00000468371 EPS8L3Q8TE67 593 aaKnown RBP6.22□□□□□ -1.41
SHQ1-205ENST00000468371 RILPQ96NA2 401 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms