RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SLC30A4O14863 429 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 NPC1O15118 1278 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 MED7O43513 233 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 P2RY2P41231 377 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 RGS7P49802 495 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 CREB5Q02930 508 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 AASDHQ4L235 1098 aaPredicted RBP19.93■□□□□ 0.78
COL7A1-207ENST00000467985 EGFLAMQ63HQ2 1017 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 MSANTD2Q6P1R3 559 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 TRIM65Q6PJ69 517 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 TOGARAM2Q6ZUX3 1019 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 CREBRFQ8IUR6 639 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 HCN2Q9UL51 889 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 INVSQ9Y283 1065 aa19.93■□□□□ 0.78
COL7A1-207ENST00000467985 BCLAF3A2AJT9 711 aaKnown RBP19.92■□□□□ 0.78
COL7A1-207ENST00000467985 MAP3K13O43283 966 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 SART1O43290 800 aaKnown RBP19.92■□□□□ 0.78
COL7A1-207ENST00000467985 LIMK1P53667 647 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 SF3A2Q15428 464 aaKnown RBP19.92■□□□□ 0.78
COL7A1-207ENST00000467985 TPD52L1Q16890 204 aaPredicted RBP19.92■□□□□ 0.78
COL7A1-207ENST00000467985 SPDYCQ5MJ68 293 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 GBP6Q6ZN66 633 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 DDI1Q8WTU0 396 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 UCMAQ8WVF2 138 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 GABRG3Q99928 467 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 TRIM62Q9BVG3 475 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 DACH1Q9UI36 760 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 STOML2Q9UJZ1 356 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 SPTBN2O15020 2390 aa19.92■□□□□ 0.78
COL7A1-207ENST00000467985 CAVIN2O95810 425 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 LTFP02788 710 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 GPD2P43304 727 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 ACADSBP45954 432 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 RPL34P49207 117 aaKnown RBP19.91■□□□□ 0.78
COL7A1-207ENST00000467985 MPPE1Q53F39 396 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 ADGRF1Q5T601 910 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 LPCAT2Q7L5N7 544 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 ANKS1BQ7Z6G8 1248 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 FAM114A1Q8IWE2 563 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 UNC45BQ8IWX7 931 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 STK32AQ8WU08 396 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 DDX1Q92499 740 aaKnown RBP19.91■□□□□ 0.78
COL7A1-207ENST00000467985 MED15Q96RN5 788 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 CRACR2AQ9BSW2 395 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 IRX2Q9BZI1 471 aaPredicted RBP19.91■□□□□ 0.78
COL7A1-207ENST00000467985 THAP9Q9H5L6 903 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 SFMBT1Q9UHJ3 866 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 PLXND1Q9Y4D7 1925 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 ABCA7Q8IZY2 2146 aa19.91■□□□□ 0.78
COL7A1-207ENST00000467985 THADAQ6YHU6 1953 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 A0A1W2PQF6 199 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 TIMM44O43615 452 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 GDF9O60383 454 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 GABBR2O75899 941 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 PRKCSHP14314 528 aaPredicted RBP19.9■□□□□ 0.78
COL7A1-207ENST00000467985 GABRG2P18507 467 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 PTMSP20962 102 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 BCKDHBP21953 392 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 DPP6P42658 865 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 WASP42768 502 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 MTIF2P46199 727 aaKnown RBP19.9■□□□□ 0.78
COL7A1-207ENST00000467985 RING1Q06587 406 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 EIF4HQ15056 248 aaKnown RBP19.9■□□□□ 0.78
COL7A1-207ENST00000467985 CCDC6Q16204 474 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 EXOC3L4Q17RC7 722 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 MAP7D1Q3KQU3 841 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 NUGGCQ68CJ6 796 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 CYP2U1Q7Z449 544 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 IRF2BP1Q8IU81 584 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 PIWIL1Q96J94 861 aaKnown RBP19.9■□□□□ 0.78
COL7A1-207ENST00000467985 ACOX2Q99424 681 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 ST7Q9NRC1 585 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 APEX2Q9UBZ4 518 aa19.9■□□□□ 0.78
COL7A1-207ENST00000467985 PIK3R2O00459 728 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 ZNF217O75362 1048 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 LETM1O95202 739 aaPredicted RBP19.89■□□□□ 0.77
COL7A1-207ENST00000467985 CALCAP01258 141 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 ERCC5P28715 1186 aaPredicted RBP19.89■□□□□ 0.77
COL7A1-207ENST00000467985 GNA15P30679 374 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 DHPSP49366 369 aaPredicted RBP19.89■□□□□ 0.77
COL7A1-207ENST00000467985 SLC36A4Q6YBV0 504 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 BEND5Q7L4P6 421 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 IPO4Q8TEX9 1081 aaKnown RBP19.89■□□□□ 0.77
COL7A1-207ENST00000467985 ZNF606Q8WXB4 792 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 RLN3Q8WXF3 142 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 P2RY11Q96G91 374 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 MIS12Q9H081 205 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 NUP62CLQ9H1M0 184 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 LMBRD1Q9NUN5 540 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 CACNA2D2Q9NY47 1150 aa19.89■□□□□ 0.77
COL7A1-207ENST00000467985 DCDC2BA2VCK2 349 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 MSI1O43347 362 aaKnown RBP19.88■□□□□ 0.77
COL7A1-207ENST00000467985 THAP12O43422 761 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 IGLV3-27P01718 113 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 NCAM1P13591 858 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 SLC9A1P19634 815 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 SLC11A2P49281 568 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 STARD3Q14849 445 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 MAN2A1Q16706 1144 aa19.88■□□□□ 0.77
COL7A1-207ENST00000467985 CT47A1Q5JQC4 288 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms