RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 DUOXA1Q1HG43 343 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 PM20D1Q6GTS8 502 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 KIAA1324Q6UXG2 1013 aaKnown RBP20.06■□□□□ 0.8
COL9A3-206ENST00000466532 ENGASEQ8NFI3 743 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 CEP76Q8TAP6 659 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 NDRG1Q92597 394 aaKnown RBP20.06■□□□□ 0.8
COL9A3-206ENST00000466532 SLC35C1Q96A29 364 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 PLD4Q96BZ4 506 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 MRGPRX1Q96LB2 322 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 LRRC4Q9HBW1 653 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 CD93Q9NPY3 652 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 SLC6A14Q9UN76 642 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 PCNX2A6NKB5 2137 aa20.06■□□□□ 0.8
COL9A3-206ENST00000466532 ADIGQ0VDE8 80 aa20.05■□□□□ 0.8
COL9A3-206ENST00000466532 BST2Q10589 180 aaKnown RBP20.05■□□□□ 0.8
COL9A3-206ENST00000466532 STARD3Q14849 445 aa20.05■□□□□ 0.8
COL9A3-206ENST00000466532 BHLHA9Q7RTU4 235 aa20.05■□□□□ 0.8
COL9A3-206ENST00000466532 CPXM2Q8N436 756 aa20.05■□□□□ 0.8
COL9A3-206ENST00000466532 SPATA20Q8TB22 786 aa20.05■□□□□ 0.8
COL9A3-206ENST00000466532 UCMAQ8WVF2 138 aa20.05■□□□□ 0.8
COL9A3-206ENST00000466532 IPO9Q96P70 1041 aaKnown RBP20.05■□□□□ 0.8
COL9A3-206ENST00000466532 FSCN3Q9NQT6 498 aa20.05■□□□□ 0.8
COL9A3-206ENST00000466532 OLA1Q9NTK5 396 aaKnown RBP20.05■□□□□ 0.8
COL9A3-206ENST00000466532 MUC22E2RYF6 1773 aaPredicted RBP20.04■□□□□ 0.8
COL9A3-206ENST00000466532 USP24Q9UPU5 2620 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 NDUFS2O75306 463 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 VDRP11473 427 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 TBXAS1P24557 533 aaPredicted RBP20.04■□□□□ 0.8
COL9A3-206ENST00000466532 IL12RB1P42701 662 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 ATXN3P54252 364 aaPredicted RBP20.04■□□□□ 0.8
COL9A3-206ENST00000466532 FOXC1Q12948 553 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 ANKS1BQ7Z6G8 1248 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 RABEPKQ7Z6M1 372 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 SLC41A1Q8IVJ1 513 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 TRIML1Q8N9V2 468 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 DEFB124Q8NES8 71 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 UBA3Q8TBC4 463 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 DDI1Q8WTU0 396 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 PIWIL1Q96J94 861 aaKnown RBP20.04■□□□□ 0.8
COL9A3-206ENST00000466532 HSPA12BQ96MM6 686 aa20.04■□□□□ 0.8
COL9A3-206ENST00000466532 GTPBP2Q9BX10 602 aaKnown RBP20.04■□□□□ 0.8
COL9A3-206ENST00000466532 GTPBP4Q9BZE4 634 aaKnown RBP20.04■□□□□ 0.8
COL9A3-206ENST00000466532 THAP10Q9P2Z0 257 aaPredicted RBP20.04■□□□□ 0.8
COL9A3-206ENST00000466532 HOOK1Q9UJC3 728 aaKnown RBP20.04■□□□□ 0.8
COL9A3-206ENST00000466532 PSMA7O14818 248 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 NPC1O15118 1278 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 SERPINF2P08697 491 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 GFPT1Q06210 699 aaPredicted RBP20.03■□□□□ 0.8
COL9A3-206ENST00000466532 STIM1Q13586 685 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 TRIP4Q15650 581 aaPredicted RBP20.03■□□□□ 0.8
COL9A3-206ENST00000466532 FUT11Q495W5 492 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 FMNL3Q8IVF7 1028 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 FAM217AQ8IXS0 508 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 SIX6OS1Q8N1H7 587 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 UBR7Q8N806 425 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 RNF139Q8WU17 664 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 TIGD1Q96MW7 591 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 PRDM16Q9HAZ2 1276 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 CAPN10Q9HC96 672 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 METTL14Q9HCE5 456 aaKnown RBP20.03■□□□□ 0.8
COL9A3-206ENST00000466532 SFMBT1Q9UHJ3 866 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 CLEC4EQ9ULY5 219 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 GTF3C3Q9Y5Q9 886 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 CACNA1EQ15878 2313 aa20.03■□□□□ 0.8
COL9A3-206ENST00000466532 O00370 1275 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 SETSIPP0DME0 302 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 FMO5P49326 533 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 HARS2P49590 506 aaKnown RBP20.02■□□□□ 0.8
COL9A3-206ENST00000466532 NUCB2P80303 420 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 ENPP2Q13822 863 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 BECN1Q14457 450 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 BSPRYQ5W0U4 402 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 ISM2Q6H9L7 571 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 TMEM270Q6UE05 265 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 RGL4Q8IZJ4 473 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 EDEM1Q92611 657 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 SLC2A11Q9BYW1 496 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 SLC32A1Q9H598 525 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 ELOVL2Q9NXB9 296 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 KIAA1257Q9ULG3 409 aa20.02■□□□□ 0.8
COL9A3-206ENST00000466532 HBS1LQ9Y450 684 aaKnown RBP20.02■□□□□ 0.8
COL9A3-206ENST00000466532 YJEFN3A6XGL0 299 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 E7ENQ6 273 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 SYNCRIPO60506 623 aaKnown RBP20.01■□□□□ 0.79
COL9A3-206ENST00000466532 LCP1P13796 627 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 ZNF132P52740 706 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 ZNF234Q14588 700 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 EIF4HQ15056 248 aaKnown RBP20.01■□□□□ 0.79
COL9A3-206ENST00000466532 E2F5Q15329 346 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 CCDC40Q4G0X9 1142 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 MPPE1Q53F39 396 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 METTL3Q86U44 580 aaKnown RBP20.01■□□□□ 0.79
COL9A3-206ENST00000466532 HDDC3Q8N4P3 179 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 KCTD13Q8WZ19 329 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 ZNF419Q96HQ0 510 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-206ENST00000466532 DHTKD1Q96HY7 919 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-206ENST00000466532 CEP63Q96MT8 703 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 NT5C1BQ96P26 610 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 CIPCQ9C0C6 399 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 MKRN2Q9H000 416 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms