RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 FERMT1Q9BQL6 677 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 NAT9Q9BTE0 207 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 WDR18Q9BV38 432 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 CCDC106Q9BWC9 280 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 NMUR2Q9GZQ4 415 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 TSPAN10Q9H1Z9 355 aaPredicted RBP7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 CCDC68Q9H2F9 335 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 ZNF696Q9H7X3 374 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 PRDM16Q9HAZ2 1276 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 METTL5Q9NRN9 209 aaKnown RBP7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 GINM1Q9NU53 330 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 BTBD7Q9P203 1132 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 CNTN3Q9P232 1028 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 KANSL3Q9P2N6 904 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 EPS15L1Q9UBC2 864 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 DCDC2Q9UHG0 476 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 HERC5Q9UII4 1024 aaKnown RBP7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 CNOT11Q9UKZ1 510 aaKnown RBP7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 PRR12Q9ULL5 1215 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 PAIP2BQ9ULR5 123 aaKnown RBP7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 PSMD13Q9UNM6 376 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 ZNF232Q9UNY5 417 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 HBS1LQ9Y450 684 aaKnown RBP7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 NR2E3Q9Y5X4 410 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 CDY2AQ9Y6F7 541 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 CDY1Q9Y6F8 540 aa7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 ASTN2O75129 1339 aaPredicted RBP7.44□□□□□ -1.22
CLSTN1-204ENST00000464286 MYH9P35579 1960 aaKnown RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 COL16A1Q07092 1604 aaPredicted RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 C15orf38-AP3S2A0A0A6YYH1 394 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 FAM237BA0A1B0GVD1 139 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 A6NJR5 290 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 EIF4E1BA6NMX2 242 aaKnown RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 TXNDC9O14530 226 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 SLC16A4O15374 487 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 BUD23O43709 281 aaKnown RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 COQ9O75208 318 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 IGHA1P01876 353 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 ADRB2P07550 413 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 BPGMP07738 259 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 FAM58BPP0C7Q3 252 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 TNNI1P19237 187 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 AMPD1P23109 780 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 PRKCHP24723 683 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 SSTR1P30872 391 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 HOXA13P31271 388 aaPredicted RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 GJC1P36383 396 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 GARSP41250 739 aaKnown RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 HDAC4P56524 1084 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 SNX16P57768 344 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 MYL6P60660 151 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 ESRRGP62508 458 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 HPCAP84074 193 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 CNTN2Q02246 1040 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 KDSRQ06136 332 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 BTKQ06187 659 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 MYBPC3Q14896 1274 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 CNGA3Q16281 694 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 GRIK5Q16478 980 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 TAZQ16635 292 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 INSCQ1MX18 579 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 PLA2G4EQ3MJ16 856 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 ZACNQ401N2 412 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 TRAPPC3LQ5T215 181 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 FAM102BQ5T8I3 360 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 ARMC3Q5W041 872 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 MFSD7Q6UXD7 560 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 LINC00114Q6XXX2 140 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 C15orf39Q6ZRI6 1047 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 ARPINQ7Z6K5 226 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 ZNF554Q86TJ5 538 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 CBWD2Q8IUF1 395 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 NUP93Q8N1F7 819 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 FBXW8Q8N3Y1 598 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 MARCH10Q8NA82 808 aaPredicted RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 MCUQ8NE86 351 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 RIN3Q8TB24 985 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 DIS3LQ8TF46 1054 aaKnown RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 CPT1BQ92523 772 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 PWWP2AQ96N64 755 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 BIRC8Q96P09 236 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 PLEKHG4BQ96PX9 1271 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 MPHOSPH6Q99547 160 aaKnown RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 NUF2Q9BZD4 464 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 VPS33BQ9H267 617 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 FAM124BQ9H5Z6 455 aaPredicted RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 RRAGCQ9HB90 399 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 XAB2Q9HCS7 855 aaKnown RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 C8orf4Q9NR00 106 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 FBXO6Q9NRD1 293 aaPredicted RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 MARK1Q9P0L2 795 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 SLC17A7Q9P2U7 560 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 VPS28Q9UK41 221 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 FEM1BQ9UK73 627 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 MKL2Q9ULH7 1088 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 ZNRF3Q9ULT6 936 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 WDR37Q9Y2I8 494 aa7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 MAFBQ9Y5Q3 323 aaPredicted RBP7.43□□□□□ -1.22
CLSTN1-204ENST00000464286 AHDC1Q5TGY3 1603 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TCRBV9S1A1TA0A576 114 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms