RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 HEATR3Q7Z4Q2 680 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 ADSSL1Q8N142 457 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 OR5M3Q8NGP4 307 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 ATP8B4Q8TF62 1192 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 GAB3Q8WWW8 586 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 GBF1Q92538 1859 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 YME1L1Q96TA2 773 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 LLPHQ9BRT6 129 aaKnown RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 OSBPL6Q9BZF3 934 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 NRDE2Q9H7Z3 1164 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 GPRC5BQ9NZH0 403 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 PNMA2Q9UL42 364 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 CCPG1Q9ULG6 757 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 EDARQ9UNE0 448 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 SCN10AQ9Y5Y9 1956 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 TPRP12270 2363 aaKnown RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 MED19A0JLT2 244 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 VPS37CA5D8V6 355 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 B4DLN1 442 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 ZBTB5O15062 677 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 STX6O43752 255 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 DEXIO95424 95 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 PDGFBP01127 241 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 GH1P01241 217 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 MMP1P03956 469 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 MAKP20794 623 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 HOXA13P31271 388 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 KIF5BP33176 963 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 TOB1P50616 345 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 MRPL12P52815 198 aaKnown RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 MGAT5Q09328 741 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 TERF2Q15554 542 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 PTPN21Q16825 1174 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 LY6KQ17RY6 165 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 GPATCH4Q5T3I0 446 aaKnown RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 BROXQ5VW32 411 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 USP17L6PQ6QN14 398 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 CDYL2Q8N8U2 506 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 FBXO18Q8NFZ0 1043 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 IL31RAQ8NI17 732 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 SPPL3Q8TCT6 385 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 SEPT8Q92599 483 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 P2RX5Q93086 422 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF689Q96CS4 500 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 BARHL2Q9NY43 387 aa4.05□□□□□ -1.76
SCFD1-204ENST00000463622 USP15Q9Y4E8 981 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-204ENST00000463622 CHD8Q9HCK8 2581 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 NCOR2Q9Y618 2525 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 EP300Q09472 2414 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-204ENST00000463622 CACNA1GO43497 2377 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 WDR87Q6ZQQ6 2873 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 CCDC196A0A1B0GTZ2 297 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 MEIS2O14770 477 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 MAFGO15525 162 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 CAND2O75155 1236 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 GLP2RO95838 553 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 DNAJB1P25685 340 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 SMARCA1P28370 1054 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 THPOP40225 353 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 NAPAP54920 295 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 MAN2A1Q16706 1144 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 KIAA0753Q2KHM9 967 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 JAKMIP3Q5VZ66 844 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 TMEM184AQ6ZMB5 413 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 XYLT1Q86Y38 959 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 DIS3L2Q8IYB7 885 aaKnown RBP4.04□□□□□ -1.76
SCFD1-204ENST00000463622 PPM1KQ8N3J5 372 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 TMEM105Q8N8V8 129 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF610Q8N9Z0 462 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 FAM184AQ8NB25 1140 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 MDGA1Q8NFP4 955 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 OR2W6PQ8NHA6 318 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 PPTC7Q8NI37 304 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 PPP1R14CQ8TAE6 165 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 ST8SIA2Q92186 375 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 APBB2Q92870 758 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 TNPO1Q92973 898 aaKnown RBP4.04□□□□□ -1.76
SCFD1-204ENST00000463622 GJA10Q969M2 543 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 RMDN1Q96DB5 314 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 RRP36Q96EU6 259 aaKnown RBP4.04□□□□□ -1.76
SCFD1-204ENST00000463622 C8orf76Q96K31 380 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 IWS1Q96ST2 819 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 CEP89Q96ST8 783 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 MPHOSPH6Q99547 160 aaKnown RBP4.04□□□□□ -1.76
SCFD1-204ENST00000463622 CPPED1Q9BRF8 314 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-204ENST00000463622 C16orf70Q9BSU1 422 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 KATNAL1Q9BW62 490 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 IFIH1Q9BYX4 1025 aaKnown RBP4.04□□□□□ -1.76
SCFD1-204ENST00000463622 S1PR5Q9H228 398 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 EMC7Q9NPA0 242 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 EVLQ9UI08 416 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-204ENST00000463622 TMPRSS11EQ9UL52 423 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 PCDHA6Q9UN73 950 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 SORCS3Q9UPU3 1222 aa4.04□□□□□ -1.76
SCFD1-204ENST00000463622 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-204ENST00000463622 A0A087X0B3 334 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 SMCO2A6NFE2 343 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 ENPP3O14638 875 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 HOXA3O43365 443 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 EIF3JO75822 258 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms