RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SPECC1L-ADORA2AF8WAN1 911 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 M0QYT0 321 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 SCAMP3O14828 347 aaKnown RBP20.6■□□□□ 0.89
COL9A3-204ENST00000463487 AKR1B10O60218 316 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 CYBBP04839 570 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 ABCB4P21439 1286 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 SDC4P31431 198 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 CCR1P32246 355 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 SULT1E1P49888 294 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 STARD6P59095 220 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 GAD2Q05329 585 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 NME3Q13232 169 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 SLC25A52Q3SY17 297 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 DCUN1D2Q6PH85 259 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 ADAM32Q8TC27 787 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 ISCUQ9H1K1 167 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 MRPL47Q9HD33 250 aaKnown RBP20.6■□□□□ 0.89
COL9A3-204ENST00000463487 SPHK2Q9NRA0 654 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 TAS2R14Q9NYV8 317 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 TMEM59LQ9UK28 342 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 AGO1Q9UL18 857 aaKnown RBP20.6■□□□□ 0.89
COL9A3-204ENST00000463487 SCINQ9Y6U3 715 aa20.6■□□□□ 0.89
COL9A3-204ENST00000463487 KRBA1A5PL33 1030 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 GOLGA6L3A6NEY3 463 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 SIGLEC16A6NMB1 481 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 GREM1O60565 184 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 IGLV3-25P01717 112 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 CYP17A1P05093 508 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 PLEKP08567 350 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-204ENST00000463487 ADH5P11766 374 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 CTHP32929 405 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 EIF4A3P38919 411 aaKnown RBP20.59■□□□□ 0.89
COL9A3-204ENST00000463487 MAPK8IP2Q13387 824 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-204ENST00000463487 DHCR24Q15392 516 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 SLC18A3Q16572 532 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 PREPLQ4J6C6 727 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-204ENST00000463487 TMEM31Q5JXX7 168 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 ALKBH5Q6P6C2 394 aaKnown RBP20.59■□□□□ 0.89
COL9A3-204ENST00000463487 WDR59Q6PJI9 974 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 BMP8AQ7Z5Y6 402 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 SUGP1Q8IWZ8 645 aaKnown RBP20.59■□□□□ 0.89
COL9A3-204ENST00000463487 ATP6V0D2Q8N8Y2 350 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 FLCNQ8NFG4 579 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 TTC8Q8TAM2 541 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 FAM3CQ92520 227 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 AZIN2Q96A70 460 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 PBXIP1Q96AQ6 731 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 ZNF653Q96CK0 615 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 PANX2Q96RD6 677 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 NPY6RQ99463 290 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 DDX23Q9BUQ8 820 aaKnown RBP20.59■□□□□ 0.89
COL9A3-204ENST00000463487 TBC1D17Q9HA65 648 aa20.59■□□□□ 0.89
COL9A3-204ENST00000463487 SYNJ2BP-COX16A0A087WUM0 186 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 A0A087X0T9 212 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 KANSL1LA0AUZ9 987 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 TYW5A2RUC4 315 aaKnown RBP20.58■□□□□ 0.89
COL9A3-204ENST00000463487 NCAM2O15394 837 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 FAM228BP0C875 321 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 PDGFRAP16234 1089 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 RRM1P23921 792 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 FLT3P36888 993 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 DEUP1Q05D60 604 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 PPP2R5DQ14738 602 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 ANO4Q32M45 955 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 LY6G5CQ5SRR4 150 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 CCDC122Q5T0U0 273 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 ADGRF1Q5T601 910 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 PHLDB2Q86SQ0 1253 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 CPXM2Q8N436 756 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 TC2NQ8N9U0 490 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 OLIG1Q8TAK6 271 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 WBP2Q969T9 261 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 PGAP3Q96FM1 320 aaPredicted RBP20.58■□□□□ 0.89
COL9A3-204ENST00000463487 BTN2A3PQ96KV6 586 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 IRX2Q9BZI1 471 aaPredicted RBP20.58■□□□□ 0.89
COL9A3-204ENST00000463487 NHEJ1Q9H9Q4 299 aaPredicted RBP20.58■□□□□ 0.89
COL9A3-204ENST00000463487 COX16Q9P0S2 106 aa20.58■□□□□ 0.89
COL9A3-204ENST00000463487 CNOT8Q9UFF9 292 aaKnown RBP20.58■□□□□ 0.89
COL9A3-204ENST00000463487 PRR33A8MZF0 331 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-204ENST00000463487 HOXC11O43248 304 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-204ENST00000463487 GPR37L1O60883 481 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 KLKB1P03952 638 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 GJA4P35212 333 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 RDXP35241 583 aaKnown RBP20.57■□□□□ 0.88
COL9A3-204ENST00000463487 UBXN2BQ14CS0 331 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 BRMS1LQ5PSV4 323 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 ACBD5Q5T8D3 534 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-204ENST00000463487 RXFP2Q8WXD0 754 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 NT5C3BQ969T7 300 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 SLC39A13Q96H72 371 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 FCRL2Q96LA5 508 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-204ENST00000463487 MCEEQ96PE7 176 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 XPO6Q96QU8 1125 aaKnown RBP20.57■□□□□ 0.88
COL9A3-204ENST00000463487 BBS2Q9BXC9 721 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 STOML2Q9UJZ1 356 aa20.57■□□□□ 0.88
COL9A3-204ENST00000463487 COL4A2P08572 1712 aa20.56■□□□□ 0.88
COL9A3-204ENST00000463487 C2CD4BA6NLJ0 364 aa20.56■□□□□ 0.88
COL9A3-204ENST00000463487 ACSL4O60488 711 aa20.56■□□□□ 0.88
COL9A3-204ENST00000463487 MOCS2O96007 188 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms