RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 WDR35Q9P2L0 1181 aa16.52■□□□□ 0.24
ERCC3-206ENST00000462306 FBXO4Q9UKT5 387 aa16.52■□□□□ 0.24
ERCC3-206ENST00000462306 MYO6Q9UM54 1294 aa16.52■□□□□ 0.24
ERCC3-206ENST00000462306 FAM170AA1A519 330 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 ANTXRLA6NF34 631 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.51■□□□□ 0.23
ERCC3-206ENST00000462306 NEDD8-MDP1E9PL57 170 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 K7EQS6 105 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 GFRA2O00451 464 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 CACNG3O60359 315 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 HSF2BPO75031 334 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 RNF40O75150 1001 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 TULP3O75386 442 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 GRAP2O75791 330 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 KAT7O95251 611 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 LATS1O95835 1130 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 PENKP01210 267 aaPredicted RBP16.51■□□□□ 0.23
ERCC3-206ENST00000462306 SP9P0CG40 484 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 TYRP14679 529 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 UBASH3AP57075 661 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 SATB1Q01826 763 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 EIF4EBP2Q13542 120 aaPredicted RBP16.51■□□□□ 0.23
ERCC3-206ENST00000462306 DCAF6Q58WW2 860 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 FYB2Q5VWT5 728 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 IRF2BP2Q7Z5L9 587 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 XYLT1Q86Y38 959 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 DEFB106AQ8N104 65 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 C18orf8Q96DM3 657 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 FCRL2Q96LA5 508 aaPredicted RBP16.51■□□□□ 0.23
ERCC3-206ENST00000462306 TLR6Q9Y2C9 796 aa16.51■□□□□ 0.23
ERCC3-206ENST00000462306 KIAA1549LQ6ZVL6 1849 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 LRRC53A6NM62 1247 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 CHURC1-FNTBB4DL54 471 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 TRIM24O15164 1050 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 IRAK2O43187 625 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 DAB1O75553 588 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 TRUB2O95900 331 aaKnown RBP16.5■□□□□ 0.23
ERCC3-206ENST00000462306 CHRM1P11229 460 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-206ENST00000462306 UNGP13051 313 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-206ENST00000462306 TDGF1P13385 188 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 FERP16591 822 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 SCNN1AP37088 669 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 GRIA2P42262 883 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 CXCL12P48061 93 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 CCR3P51677 355 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 CSTF1Q05048 431 aaKnown RBP16.5■□□□□ 0.23
ERCC3-206ENST00000462306 KDSRQ06136 332 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 ZNF528Q3MIS6 628 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 C2CD6Q53TS8 623 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 FIGNQ5HY92 759 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 ADGRF1Q5T601 910 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 NUGGCQ68CJ6 796 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 TRIM72Q6ZMU5 477 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 UNC45BQ8IWX7 931 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 ATOH1Q92858 354 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-206ENST00000462306 AZIN2Q96A70 460 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 SYT11Q9BT88 431 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 EDEM3Q9BZQ6 932 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 ARHGEF4Q9NR80 690 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 FAM86C1Q9NVL1 165 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 PLK2Q9NYY3 685 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 IFNKQ9P0W0 207 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 DEC1Q9P2X7 70 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 FBXO10Q9UK96 956 aa16.5■□□□□ 0.23
ERCC3-206ENST00000462306 PAPSS2O95340 614 aaPredicted RBP16.49■□□□□ 0.23
ERCC3-206ENST00000462306 APODP05090 189 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 CISD3P0C7P0 127 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 MMP8P22894 467 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 E4F1Q66K89 784 aaPredicted RBP16.49■□□□□ 0.23
ERCC3-206ENST00000462306 TSSK4Q6SA08 328 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 SLC30A5Q8TAD4 765 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 OLIG1Q8TAK6 271 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 USP33Q8TEY7 942 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 NELL1Q92832 810 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 BHMTQ93088 406 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 XPO6Q96QU8 1125 aaKnown RBP16.49■□□□□ 0.23
ERCC3-206ENST00000462306 AGPAT1Q99943 283 aa16.49■□□□□ 0.23
ERCC3-206ENST00000462306 DNAJC17Q9NVM6 304 aaKnown RBP16.49■□□□□ 0.23
ERCC3-206ENST00000462306 K7ESF4 209 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 ACSL4O60488 711 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 CCDC172P0C7W6 258 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 NOS2P35228 1153 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 PLA2G5P39877 138 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 MATKP42679 507 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 TNFRSF4P43489 277 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 SLC11A2P49281 568 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 ZNF445P59923 1031 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 CDK17Q00537 523 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 CENPCQ03188 943 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 PTP4A2Q12974 167 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 CLEC16AQ2KHT3 1053 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 FAM133BQ5BKY9 247 aaKnown RBP16.48■□□□□ 0.23
ERCC3-206ENST00000462306 ZC3H12AQ5D1E8 599 aaKnown RBP16.48■□□□□ 0.23
ERCC3-206ENST00000462306 OTUD1Q5VV17 481 aaPredicted RBP16.48■□□□□ 0.23
ERCC3-206ENST00000462306 NADSYN1Q6IA69 706 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 MMS22LQ6ZRQ5 1243 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 TERB1Q8NA31 727 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 MSANTD4Q8NCY6 345 aa16.48■□□□□ 0.23
ERCC3-206ENST00000462306 RPLP0P6Q8NHW5 317 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms