RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 GLUD1P00367 558 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 SRFP11831 508 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 EPCAMP16422 314 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 TNNI1P19237 187 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 ACO1P21399 889 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 IBSPP21815 317 aaPredicted RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 EEF1GP26641 437 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 CFPP27918 469 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 OR1D2P34982 312 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 MAGEA11P43364 429 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 GCLMP48507 274 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 LHX1P48742 406 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 MXI1P50539 228 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 ZNF132P52740 706 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 NOP14P78316 857 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 GCNT1Q02742 428 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 ITIH3Q06033 890 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 MYO1EQ12965 1108 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 SMAD4Q13485 552 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 BMS1Q14692 1282 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 GAB4Q2WGN9 574 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 ZNF318Q5VUA4 2279 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 OVOS1Q6IE37 1185 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 KLHL10Q6JEL2 608 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 KIAA1841Q6NSI8 718 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 CAVIN1Q6NZI2 390 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 PAQR9Q6ZVX9 377 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 SYDE1Q6ZW31 735 aaPredicted RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 GPR149Q86SP6 731 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 UNC93AQ86WB7 457 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 DHX40Q8IX18 779 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 FBXO15Q8NCQ5 510 aaPredicted RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 FEZF2Q8TBJ5 459 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 C2orf15Q8WU43 125 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 FUBP3Q96I24 572 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS36-202ENST00000462289 CNOT6LQ96LI5 555 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 KRTAP4-2Q9BYR5 136 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 SDCBP2Q9H190 292 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 DUSP15Q9H1R2 295 aaPredicted RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 SFXN1Q9H9B4 322 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 SIX2Q9NPC8 291 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 CRTAC1Q9NQ79 661 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 RAB20Q9NX57 234 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 IL37Q9NZH6 218 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 THEGQ9P2T0 379 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 LIMA1Q9UHB6 759 aaKnown RBP6.12□□□□□ -1.43
VPS36-202ENST00000462289 CDY1Q9Y6F8 540 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 MYO16Q9Y6X6 1858 aa6.12□□□□□ -1.43
VPS36-202ENST00000462289 FAM92AA1XBS5 289 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 ANKRD33BA6NCL7 494 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 N4BP1O75113 896 aaKnown RBP6.11□□□□□ -1.43
VPS36-202ENST00000462289 SEC24AO95486 1093 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 FGFR1OPO95684 399 aaKnown RBP6.11□□□□□ -1.43
VPS36-202ENST00000462289 HPXP02790 462 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 KRT13P13646 458 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 RPL17P18621 184 aaKnown RBP6.11□□□□□ -1.43
VPS36-202ENST00000462289 LMO2P25791 158 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 PCSK1P29120 753 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 STX17P56962 302 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 ZNF445P59923 1031 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 DAB2P98082 770 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 MYL5Q02045 173 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 MEA1Q16626 185 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 MAN2A1Q16706 1144 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 ZNF699Q32M78 642 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 WDR72Q3MJ13 1102 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 ZSCAN23Q3MJ62 389 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 CTXN3Q4LDR2 81 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 TCP11X2Q5H9J9 407 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 ZNF667Q5HYK9 610 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 RALGPS1Q5JS13 557 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 TMEM201Q5SNT2 666 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 ADGRF2Q8IZF7 708 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 TTC39CQ8N584 583 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 KREMEN2Q8NCW0 462 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 ASB2Q96Q27 587 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 TMEM209Q96SK2 561 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 MRPL45Q9BRJ2 306 aaKnown RBP6.11□□□□□ -1.43
VPS36-202ENST00000462289 NAA15Q9BXJ9 866 aaKnown RBP6.11□□□□□ -1.43
VPS36-202ENST00000462289 SMYD3Q9H7B4 428 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 CSNK1G1Q9HCP0 422 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 WDR6Q9NNW5 1121 aaKnown RBP6.11□□□□□ -1.43
VPS36-202ENST00000462289 MAN1C1Q9NR34 630 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 SAMSN1Q9NSI8 373 aaKnown RBP6.11□□□□□ -1.43
VPS36-202ENST00000462289 TMEM30AQ9NV96 361 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 TMLHEQ9NVH6 421 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 SLAMF8Q9P0V8 285 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 PRKAG3Q9UGI9 489 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 DPP7Q9UHL4 492 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 CD207Q9UJ71 328 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 CDH9Q9ULB4 789 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 BARX2Q9UMQ3 279 aaPredicted RBP6.11□□□□□ -1.43
VPS36-202ENST00000462289 TLR6Q9Y2C9 796 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 NFE2L3Q9Y4A8 694 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 TIMM13Q9Y5L4 95 aaPredicted RBP6.11□□□□□ -1.43
VPS36-202ENST00000462289 SNX9Q9Y5X1 595 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 ZDBF2Q9HCK1 2354 aa6.11□□□□□ -1.43
VPS36-202ENST00000462289 NCANO14594 1321 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 MYBPHLA2RUH7 354 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 LOC730098B7Z3J9 87 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms