RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ACADMP11310 421 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 SYT1P21579 422 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 CHKAP35790 457 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 NASPP49321 788 aaPredicted RBP11.41□□□□□ -0.58
CBX3-205ENST00000462165 PSEN1P49768 467 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 ORC1Q13415 861 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 ZNF234Q14588 700 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 SUZ12Q15022 739 aaKnown RBP11.41□□□□□ -0.58
CBX3-205ENST00000462165 CLEC20AQ6ZU45 233 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 UNC13DQ70J99 1090 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 RBBP8NLQ8NC74 664 aaPredicted RBP11.41□□□□□ -0.58
CBX3-205ENST00000462165 ELMO3Q96BJ8 720 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 PIWIL1Q96J94 861 aaKnown RBP11.41□□□□□ -0.58
CBX3-205ENST00000462165 HNRNPABQ99729 332 aaKnown RBP11.41□□□□□ -0.58
CBX3-205ENST00000462165 C7orf25Q9BPX7 421 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 FAM49BQ9NUQ9 324 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 TFIP11Q9UBB9 837 aaKnown RBP11.41□□□□□ -0.58
CBX3-205ENST00000462165 HMGXB4Q9UGU5 601 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 EIF2B4Q9UI10 523 aaKnown RBP11.41□□□□□ -0.58
CBX3-205ENST00000462165 NUDT5Q9UKK9 219 aa11.41□□□□□ -0.58
CBX3-205ENST00000462165 A0A1B0GVT2 93 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 EIF4E1BA6NMX2 242 aaKnown RBP11.4□□□□□ -0.58
CBX3-205ENST00000462165 E9PAM4 449 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 STX6O43752 255 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 TRIM21P19474 475 aaKnown RBP11.4□□□□□ -0.58
CBX3-205ENST00000462165 ADORA2BP29275 332 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 CSNK1EP49674 416 aaKnown RBP11.4□□□□□ -0.58
CBX3-205ENST00000462165 AFF3P51826 1226 aaKnown RBP11.4□□□□□ -0.58
CBX3-205ENST00000462165 COG7P83436 770 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 CYP4F3Q08477 520 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 EIF4HQ15056 248 aaKnown RBP11.4□□□□□ -0.58
CBX3-205ENST00000462165 KNOP1Q1ED39 458 aaKnown RBP11.4□□□□□ -0.58
CBX3-205ENST00000462165 SGSM1Q2NKQ1 1148 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 C10orf120Q5SQS8 335 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 CCDC186Q7Z3E2 898 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 ANKS1BQ7Z6G8 1248 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 TADA2BQ86TJ2 420 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 IQUBQ8NA54 791 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 LINC00301Q8NCQ3 95 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 DHX58Q96C10 678 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 DCLK3Q9C098 648 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 OSGEPQ9NPF4 335 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 ELOVL2Q9NXB9 296 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 NAGPAQ9UK23 515 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 BTBD3Q9Y2F9 522 aa11.4□□□□□ -0.58
CBX3-205ENST00000462165 MUC22E2RYF6 1773 aaPredicted RBP11.4□□□□□ -0.58
CBX3-205ENST00000462165 ASH1LQ9NR48 2969 aaKnown RBP11.4□□□□□ -0.59
CBX3-205ENST00000462165 HELZ2Q9BYK8 2649 aaKnown RBP11.39□□□□□ -0.59
CBX3-205ENST00000462165 COL5A1P20908 1838 aaPredicted RBP11.39□□□□□ -0.59
CBX3-205ENST00000462165 TNFSF14O43557 240 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 PLXNA2O75051 1894 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 ASS1P00966 412 aaKnown RBP11.39□□□□□ -0.59
CBX3-205ENST00000462165 RPN1P04843 607 aaKnown RBP11.39□□□□□ -0.59
CBX3-205ENST00000462165 PRKCHP24723 683 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 CORO1AP31146 461 aaKnown RBP11.39□□□□□ -0.59
CBX3-205ENST00000462165 ASPAP45381 313 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 KIF11P52732 1056 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 INCA1Q0VD86 236 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 SMAD1Q15797 465 aaKnown RBP11.39□□□□□ -0.59
CBX3-205ENST00000462165 PTPRNQ16849 979 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 KIF19Q2TAC6 998 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 ZACNQ401N2 412 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 SCD5Q86SK9 330 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 MARCH9Q86YJ5 346 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 CPXM2Q8N436 756 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
CBX3-205ENST00000462165 OR2T3Q8NH03 318 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 GOLGA5Q8TBA6 731 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 TMEM174Q8WUU8 243 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 TAF4BQ92750 862 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 JAKMIP2Q96AA8 810 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 CYFIP2Q96F07 1278 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 CDK5RAP1Q96SZ6 601 aaKnown RBP11.39□□□□□ -0.59
CBX3-205ENST00000462165 SLC2A11Q9BYW1 496 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 ZSCAN16Q9H4T2 348 aaPredicted RBP11.39□□□□□ -0.59
CBX3-205ENST00000462165 MAGEF1Q9HAY2 307 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 SLC39A2Q9NP94 309 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 CLIC5Q9NZA1 410 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.39□□□□□ -0.59
CBX3-205ENST00000462165 SNX11Q9Y5W9 270 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 USP3Q9Y6I4 520 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 SLCO1B1Q9Y6L6 691 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 ASXL3Q9C0F0 2248 aa11.39□□□□□ -0.59
CBX3-205ENST00000462165 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 GOLGA8CPA6NN73 597 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 SPTLC2O15270 562 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 PAPSS1O43252 624 aaPredicted RBP11.38□□□□□ -0.59
CBX3-205ENST00000462165 PCDHGA12O60330 932 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 PPP6R2O75170 966 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 CYBBP04839 570 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 EPHX1P07099 455 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 RALAP11233 206 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 ACSL1P33121 698 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 GRK6P43250 576 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 GRIA4P48058 902 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 DLG4P78352 724 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 CAMK2GQ13555 558 aaPredicted RBP11.38□□□□□ -0.59
CBX3-205ENST00000462165 STK38Q15208 465 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 TEAD4Q15561 434 aa11.38□□□□□ -0.59
CBX3-205ENST00000462165 TMEM215Q68D42 235 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms