RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 COA3Q9Y2R0 106 aaPredicted RBP4.83□□□□□ -1.64
CNN3-204ENST00000461018 VWA8A3KMH1 1905 aa4.83□□□□□ -1.64
CNN3-204ENST00000461018 HELZP42694 1942 aaKnown RBP4.83□□□□□ -1.64
CNN3-204ENST00000461018 ZFHX3Q15911 3703 aa4.83□□□□□ -1.64
CNN3-204ENST00000461018 UTP20O75691 2785 aaKnown RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 FLNCQ14315 2725 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 ATXN2Q99700 1313 aaKnown RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 ESYT2A0FGR8 921 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 MEIS2O14770 477 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 ZBTB43O43298 467 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 RHOBTB1O94844 696 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 C22orf31O95567 290 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 CPP00450 1065 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 ALDH2P05091 517 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 GP1BBP13224 206 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 LCP1P13796 627 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 GJA1P17302 382 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 PSMA5P28066 241 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 GRIA2P42262 883 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 CSRP3P50461 194 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 STAT5BP51692 787 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 KCNAB2Q13303 367 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 TRIP6Q15654 476 aaKnown RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 SLC10A6Q3KNW5 377 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 SPATS1Q496A3 300 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 PABPC1LQ4VXU2 614 aaKnown RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 TRIM61Q5EBN2 209 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 PPM1LQ5SGD2 360 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 E4F1Q66K89 784 aaPredicted RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 NAIF1Q69YI7 327 aaPredicted RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 USP17L6PQ6QN14 398 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 ETV3LQ6ZN32 361 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 TMC8Q8IU68 726 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 LRRC71Q8N4P6 559 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 FAM26EQ8N5C1 309 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 SRBD1Q8N5C6 995 aaKnown RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 METTL13Q8N6R0 699 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 RCBTB1Q8NDN9 531 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 ZFYVE19Q96K21 471 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 CCDC140Q96MF4 163 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 TM6SF1Q9BZW5 370 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 PSTPIP2Q9H939 334 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 FBRSL1Q9HCM7 1045 aaKnown RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 LUC7LQ9NQ29 371 aaKnown RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 DKK4Q9UBT3 224 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 MRPS23Q9Y3D9 190 aaKnown RBP4.82□□□□□ -1.64
CNN3-204ENST00000461018 PAXBP1Q9Y5B6 917 aa4.82□□□□□ -1.64
CNN3-204ENST00000461018 USP9YO00507 2555 aaPredicted RBP4.81□□□□□ -1.64
CNN3-204ENST00000461018 CCDC163A0A0D9SF12 145 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 SPECC1L-ADORA2AF8WAN1 911 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 CAPN9O14815 690 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 MOSPD3O75425 235 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 AKAP3O75969 853 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 PLEKHA8P1O95397 391 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 RHOP08100 348 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 MYF5P13349 255 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 STAT5AP42229 794 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 PTGER3P43115 390 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 OR1G1P47890 313 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 DHPSP49366 369 aaPredicted RBP4.81□□□□□ -1.64
CNN3-204ENST00000461018 KPNA1P52294 538 aaPredicted RBP4.81□□□□□ -1.64
CNN3-204ENST00000461018 GFRA1P56159 465 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 CLDN6P56747 220 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 ACTR2P61160 394 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 PPP2R2AP63151 447 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 LRRC32Q14392 662 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 ELF2Q15723 593 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 VWA3BQ502W6 1294 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 TAF1BQ53T94 588 aaPredicted RBP4.81□□□□□ -1.64
CNN3-204ENST00000461018 ODR4Q5SWX8 454 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 NT5DC1Q5TFE4 455 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 PMS2CLQ68D20 193 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 FSTL4Q6MZW2 842 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 BLOC1S2Q6QNY1 142 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 GLB1LQ6UWU2 654 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 TOGARAM2Q6ZUX3 1019 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 USP53Q70EK8 1073 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 NIPA1Q7RTP0 329 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 MICU3Q86XE3 530 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 COLGALT2Q8IYK4 626 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 LINC01465Q8N7H1 131 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 SLC7A14Q8TBB6 771 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 CCDC12Q8WUD4 166 aaPredicted RBP4.81□□□□□ -1.64
CNN3-204ENST00000461018 SEC14L1Q92503 715 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 TNPO1Q92973 898 aaKnown RBP4.81□□□□□ -1.64
CNN3-204ENST00000461018 CHFRQ96EP1 664 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 GTPBP2Q9BX10 602 aaKnown RBP4.81□□□□□ -1.64
CNN3-204ENST00000461018 TPSD1Q9BZJ3 242 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 ZFP14Q9HCL3 533 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 RIC8AQ9NPQ8 531 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 BARHL2Q9NY43 387 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 GTSE1Q9NYZ3 720 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 FBXL7Q9UJT9 491 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 SLC8A2Q9UPR5 921 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 UBIAD1Q9Y5Z9 338 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 ICE1Q9Y2F5 2266 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 LRRK2Q5S007 2527 aa4.81□□□□□ -1.64
CNN3-204ENST00000461018 TNRC6BQ9UPQ9 1833 aaKnown RBP4.81□□□□□ -1.64
CNN3-204ENST00000461018 PCDH15Q96QU1 1955 aa4.8□□□□□ -1.64
CNN3-204ENST00000461018 NFASCO94856 1347 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms