RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ADCY1Q08828 1119 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 PDIA2Q13087 525 aaKnown RBP14.62□□□□□ -0.07
ERCC3-205ENST00000460485 ADGRE1Q14246 886 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 KCNJ11Q14654 390 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 TPSAB1Q15661 275 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 LONRF1Q17RB8 773 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 MDH1BQ5I0G3 518 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 EFHC2Q5JST6 749 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 ZBED8Q8IZ13 594 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 THEM5Q8N1Q8 247 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 TMEM130Q8N3G9 435 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 PQLC3Q8N755 202 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 PCDH19Q8TAB3 1148 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 ZNF473Q8WTR7 871 aaKnown RBP14.62□□□□□ -0.07
ERCC3-205ENST00000460485 WNT8BQ93098 351 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 CHMP6Q96FZ7 201 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 ZFP42Q96MM3 310 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 GLT1D1Q96MS3 346 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 CCT8L2Q96SF2 557 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 PLCD4Q9BRC7 762 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 LRFN3Q9BTN0 628 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 DHX35Q9H5Z1 703 aaKnown RBP14.62□□□□□ -0.07
ERCC3-205ENST00000460485 ACSS3Q9H6R3 686 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 CSNK1G1Q9HCP0 422 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 XAB2Q9HCS7 855 aaKnown RBP14.62□□□□□ -0.07
ERCC3-205ENST00000460485 NKIRAS1Q9NYS0 192 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 PSMC3IPQ9P2W1 217 aaPredicted RBP14.62□□□□□ -0.07
ERCC3-205ENST00000460485 FZD10Q9ULW2 581 aa14.62□□□□□ -0.07
ERCC3-205ENST00000460485 PPP1R12AO14974 1030 aaPredicted RBP14.61□□□□□ -0.07
ERCC3-205ENST00000460485 MTSS1O43312 755 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 AP1G2O75843 785 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 GABBR2O75899 941 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 KIAA0754O94854 1291 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 IL4RP24394 825 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 FDFT1P37268 417 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 SCNN1GP51170 649 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 DAOAP59103 153 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 BASP1P80723 227 aaKnown RBP14.61□□□□□ -0.07
ERCC3-205ENST00000460485 TSPY1Q01534 308 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 PPIGQ13427 754 aaKnown RBP eCLIP14.61□□□□□ -0.074e-7■□□□□ 10.5
ERCC3-205ENST00000460485 ITGA7Q13683 1181 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 LPIN1Q14693 890 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 TRIM71Q2Q1W2 868 aaKnown RBP14.61□□□□□ -0.07
ERCC3-205ENST00000460485 INTS6LQ5JSJ4 861 aaKnown RBP14.61□□□□□ -0.07
ERCC3-205ENST00000460485 GKAP1Q5VSY0 366 aaPredicted RBP14.61□□□□□ -0.07
ERCC3-205ENST00000460485 DCLRE1AQ6PJP8 1040 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 C4orf50Q6ZRC1 276 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 UNC45BQ8IWX7 931 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 DEFB106AQ8N104 65 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 VPS52Q8N1B4 723 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 FAM71DQ8N9W8 422 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 GLIS1Q8NBF1 620 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 FAM149B1Q96BN6 582 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 ALKBH8Q96BT7 664 aaKnown RBP14.61□□□□□ -0.07
ERCC3-205ENST00000460485 C9orf72Q96LT7 481 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 CSPG4P5Q96PW8 444 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 B3GNT5Q9BYG0 378 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 ZMYND15Q9H091 742 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 VPS37BQ9H9H4 285 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 EIF2B3Q9NR50 452 aaKnown RBP14.61□□□□□ -0.07
ERCC3-205ENST00000460485 KANSL3Q9P2N6 904 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 RSPH14Q9UHP6 348 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 XPO7Q9UIA9 1087 aaKnown RBP14.61□□□□□ -0.07
ERCC3-205ENST00000460485 MYO16Q9Y6X6 1858 aa14.61□□□□□ -0.07
ERCC3-205ENST00000460485 A0A1W2PQ45 241 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-205ENST00000460485 A0A1W2PQY0 241 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 SMIM23A6NLE4 172 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 CAPN9O14815 690 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 KCNN4O15554 427 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 PRPF4O43172 522 aaKnown RBP eCLIP14.6□□□□□ -0.07
ERCC3-205ENST00000460485 PQBP1O60828 265 aaKnown RBP14.6□□□□□ -0.07
ERCC3-205ENST00000460485 CD52P31358 61 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 STX2P32856 288 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 PBX2P40425 430 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 CCT5P48643 541 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 CLCNKBP51801 687 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 TKTL1P51854 596 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 ACLYP53396 1101 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 GDF10P55107 478 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 GEMIN4P57678 1058 aaKnown RBP14.6□□□□□ -0.07
ERCC3-205ENST00000460485 PDK1Q15118 436 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 TAF5Q15542 800 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 RAB30Q15771 203 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 PPP6R3Q5H9R7 873 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-205ENST00000460485 TMEM240Q5SV17 173 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 SH3PXD2AQ5TCZ1 1133 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 HEATR6Q6AI08 1181 aaKnown RBP14.6□□□□□ -0.07
ERCC3-205ENST00000460485 SRLQ86TD4 932 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 EXOC3L1Q86VI1 746 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 ANKS4BQ8N8V4 417 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 URGCPQ8TCY9 931 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 ZBTB9Q96C00 473 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 SUSD3Q96L08 255 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 OLFM3Q96PB7 478 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 CYTH2Q99418 400 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 USP29Q9HBJ7 922 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 LRRC4CQ9HCJ2 640 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 DMAP1Q9NPF5 467 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-205ENST00000460485 CRTAC1Q9NQ79 661 aa14.6□□□□□ -0.07
ERCC3-205ENST00000460485 RGS18Q9NS28 235 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms