RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 DDI1Q8WTU0 396 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 FANCLQ9NW38 375 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 TAB2Q9NYJ8 693 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 CYTH4Q9UIA0 394 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 STOML2Q9UJZ1 356 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 AJAP1Q9UKB5 411 aaPredicted RBP23.98■■□□□ 1.43
PTPN4-208ENST00000460289 E5RJQ4 531 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 SGK1O00141 431 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 CAPN9O14815 690 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 MSI1O43347 362 aaKnown RBP23.97■■□□□ 1.43
PTPN4-208ENST00000460289 RETP07949 1114 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 CHRM1P11229 460 aaPredicted RBP23.97■■□□□ 1.43
PTPN4-208ENST00000460289 RING1Q06587 406 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 RAPGEF1Q13905 1077 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 DRAP1Q14919 205 aaPredicted RBP23.97■■□□□ 1.43
PTPN4-208ENST00000460289 MPPE1Q53F39 396 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 ADGRF1Q5T601 910 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 SDE2Q6IQ49 451 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 GPR179Q6PRD1 2367 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 GVINP1Q7Z2Y8 2422 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.97■■□□□ 1.43
PTPN4-208ENST00000460289 KIAA2013Q8IYS2 634 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 ANKRD20A12PQ8NF67 263 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 VPS16Q9H269 839 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 SLC27A6Q9Y2P4 619 aa23.97■■□□□ 1.43
PTPN4-208ENST00000460289 ZNF292O60281 2723 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 PAPSS1O43252 624 aaPredicted RBP23.96■■□□□ 1.43
PTPN4-208ENST00000460289 FYNP06241 537 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 UCHL3P15374 230 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 SLC11A2P49281 568 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 TBX4P57082 545 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 YWHAZP63104 245 aaKnown RBP23.96■■□□□ 1.43
PTPN4-208ENST00000460289 MYL5Q02045 173 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 KRT31Q15323 416 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 USP39Q53GS9 565 aaKnown RBP23.96■■□□□ 1.43
PTPN4-208ENST00000460289 FKBP15Q5T1M5 1219 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 TMEM92Q6UXU6 159 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 C11orf57Q6ZUT1 292 aaPredicted RBP23.96■■□□□ 1.43
PTPN4-208ENST00000460289 TOGARAM2Q6ZUX3 1019 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 SLC47A2Q86VL8 602 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 RASSF3Q86WH2 238 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 WDTC1Q8N5D0 677 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 AZIN2Q96A70 460 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 PPP1R13BQ96KQ4 1090 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 SERPINB11Q96P15 392 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 LSM14BQ9BX40 385 aaKnown RBP23.96■■□□□ 1.43
PTPN4-208ENST00000460289 SLC2A11Q9BYW1 496 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 IRX2Q9BZI1 471 aaPredicted RBP23.96■■□□□ 1.43
PTPN4-208ENST00000460289 POPDC2Q9HBU9 364 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 PLCB1Q9NQ66 1216 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 NAALADL1Q9UQQ1 740 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 CEP83Q9Y592 693 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 KIAA1549LQ6ZVL6 1849 aa23.96■■□□□ 1.43
PTPN4-208ENST00000460289 CFAP54Q96N23 3096 aa23.95■■□□□ 1.43
PTPN4-208ENST00000460289 IGLV3-27P01718 113 aa23.95■■□□□ 1.42
PTPN4-208ENST00000460289 NTSR1P30989 418 aa23.95■■□□□ 1.42
PTPN4-208ENST00000460289 NNTQ13423 1086 aa23.95■■□□□ 1.42
PTPN4-208ENST00000460289 ANO7Q6IWH7 933 aa23.95■■□□□ 1.42
PTPN4-208ENST00000460289 DQX1Q8TE96 717 aaKnown RBP23.95■■□□□ 1.42
PTPN4-208ENST00000460289 TMA16Q96EY4 203 aaKnown RBP23.95■■□□□ 1.42
PTPN4-208ENST00000460289 NAA15Q9BXJ9 866 aaKnown RBP23.95■■□□□ 1.42
PTPN4-208ENST00000460289 STK33Q9BYT3 514 aa23.95■■□□□ 1.42
PTPN4-208ENST00000460289 FHOD1Q9Y613 1164 aa23.95■■□□□ 1.42
PTPN4-208ENST00000460289 FRYLO94915 3013 aa23.95■■□□□ 1.42
PTPN4-208ENST00000460289 PRRT4C9JH25 899 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 ADAM23O75077 832 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 E2F5Q15329 346 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 PASD1Q8IV76 773 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 CHPFQ8IZ52 775 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 FAM160A2Q8N612 972 aaPredicted RBP23.94■■□□□ 1.42
PTPN4-208ENST00000460289 P2RY11Q96G91 374 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 LOXL4Q96JB6 756 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 DDX50Q9BQ39 737 aaKnown RBP23.94■■□□□ 1.42
PTPN4-208ENST00000460289 NAT10Q9H0A0 1025 aaKnown RBP23.94■■□□□ 1.42
PTPN4-208ENST00000460289 PDCL3Q9H2J4 239 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 ZDHHC4Q9NPG8 344 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 TLR6Q9Y2C9 796 aa23.94■■□□□ 1.42
PTPN4-208ENST00000460289 LRP3O75074 770 aa23.93■■□□□ 1.42
PTPN4-208ENST00000460289 GLI1P08151 1106 aa23.93■■□□□ 1.42
PTPN4-208ENST00000460289 PNMA6AP0CW24 399 aaPredicted RBP23.93■■□□□ 1.42
PTPN4-208ENST00000460289 CDK11BP21127 795 aaKnown RBP23.93■■□□□ 1.42
PTPN4-208ENST00000460289 EFHC1Q5JVL4 640 aa23.93■■□□□ 1.42
PTPN4-208ENST00000460289 SYPL2Q5VXT5 272 aa23.93■■□□□ 1.42
PTPN4-208ENST00000460289 C11orf74Q86VG3 221 aa23.93■■□□□ 1.42
PTPN4-208ENST00000460289 MDGA1Q8NFP4 955 aa23.93■■□□□ 1.42
PTPN4-208ENST00000460289 ZC3H10Q96K80 434 aaKnown RBP23.93■■□□□ 1.42
PTPN4-208ENST00000460289 CPXM1Q96SM3 734 aa23.93■■□□□ 1.42
PTPN4-208ENST00000460289 HCN2Q9UL51 889 aa23.93■■□□□ 1.42
PTPN4-208ENST00000460289 NPC1O15118 1278 aa23.92■■□□□ 1.42
PTPN4-208ENST00000460289 ZBTB24O43167 697 aaPredicted RBP23.92■■□□□ 1.42
PTPN4-208ENST00000460289 IRAK2O43187 625 aa23.92■■□□□ 1.42
PTPN4-208ENST00000460289 ACSL4O60488 711 aa23.92■■□□□ 1.42
PTPN4-208ENST00000460289 TSPAN3O60637 253 aa23.92■■□□□ 1.42
PTPN4-208ENST00000460289 HNRNPLP14866 589 aaKnown RBP eCLIP23.92■■□□□ 1.42
PTPN4-208ENST00000460289 CYP11B1P15538 503 aa23.92■■□□□ 1.42
PTPN4-208ENST00000460289 EGFLAMQ63HQ2 1017 aa23.92■■□□□ 1.42
PTPN4-208ENST00000460289 ANKS1BQ7Z6G8 1248 aa23.92■■□□□ 1.42
PTPN4-208ENST00000460289 KBTBD6Q86V97 674 aa23.92■■□□□ 1.42
PTPN4-208ENST00000460289 C1orf131Q8NDD1 294 aaKnown RBP23.92■■□□□ 1.42
PTPN4-208ENST00000460289 IPO4Q8TEX9 1081 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms