RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 VPS28Q9UK41 221 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 TMEM120BA0PK00 339 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 STAU1O95793 577 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 UCHL3P15374 230 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 RPL22P35268 128 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 MDH1BQ5I0G3 518 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 GPAT2Q6NUI2 795 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 HHIPL2Q6UWX4 724 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 RBM43Q6ZSC3 357 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 JAMLQ86YT9 394 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 EID3Q8N140 333 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 CACTIN-AS1Q8N1I8 211 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 ANKS1AQ92625 1134 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 KCNB2Q92953 911 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 TLR8Q9NR97 1041 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 SIK3Q9Y2K2 1263 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 PLA2G6O60733 806 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 MED26O95402 600 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 PDGFRBP09619 1106 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 VAV1P15498 845 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 CACNB3P54284 484 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 TFDP3Q5H9I0 405 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 EFCAB12Q6NXP0 572 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 VN1R5Q7Z5H4 357 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 TMEM132CQ8N3T6 1108 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 FBXO44Q9H4M3 255 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 HPS4Q9NQG7 708 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 TMEM260Q9NX78 707 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 ABI2Q9NYB9 513 aaPredicted RBP9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 CHORDC1Q9UHD1 332 aaPredicted RBP9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 ANAPC2Q9UJX6 822 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 DNPEPQ9ULA0 475 aa9.12□□□□□ -0.95
SHROOM4-203ENST00000460112 TAF4O00268 1085 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ZNF862O60290 1169 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TNFRSF8P28908 595 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 RFX3P48380 749 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TOB2Q14106 344 aaPredicted RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 PAGE2BQ5JRK9 111 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 GALNT18Q6P9A2 607 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 AHI1Q8N157 1196 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ENKURQ8TC29 256 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TMEM143Q96AN5 459 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 REEP2Q9BRK0 252 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ARHGAP28Q9P2N2 729 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 RSL24D1Q9UHA3 163 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 CLTCQ00610 1675 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 GRIK3Q13003 919 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 WASHC2DQ5SRD0 308 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 RFX8Q6ZV50 586 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 METTL5Q9NRN9 209 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 UPP2O95045 317 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TNFAIP8O95379 198 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ARHGDIBP52566 201 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ITGA8P53708 1063 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 RHOAP61586 193 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 PWP1Q13610 501 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ZNHIT3Q15649 155 aaPredicted RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 PI16Q6UXB8 463 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 SLFN11Q7Z7L1 901 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 CARNMT1Q8N4J0 409 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TRPC4APQ8TEL6 797 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TMEM159Q96B96 161 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 CAAP1Q9H8G2 361 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 USP31Q70CQ4 1352 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TPRP12270 2363 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 LCA5LO95447 670 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 PSMD4P55036 377 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 COPZ1P61923 177 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 EXOSC10Q01780 885 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 XRCC4Q13426 336 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TRIM25Q14258 630 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 GSPT2Q8IYD1 628 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 OR8H2Q8N162 312 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 FAM71DQ8N9W8 422 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ATP8B4Q8TF62 1192 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 VCPIP1Q96JH7 1222 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 MRPL9Q9BYD2 267 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 RAD51BO15315 384 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 CYP2D6P10635 497 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TNNI3P19429 210 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 SLC26A2P50443 739 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 CUL2Q13617 745 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 BCL2L14Q9BZR8 327 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 FAM49BQ9NUQ9 324 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ENTPD4Q9Y227 616 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 SNPHO15079 494 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 HLA-DRAP01903 254 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 HIST1H2ABP04908 130 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ABCB1P08183 1280 aaPredicted RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 TCN1P20061 433 aaPredicted RBP9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ATP12AP54707 1039 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 KIAA0408Q6ZU52 694 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 HIST3H2AQ7L7L0 130 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ZDHHC17Q8IUH5 632 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 HIST1H2ACQ93077 130 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 UGT2B28Q9BY64 529 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 CHST12Q9NRB3 414 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 ACTL7BQ9Y614 415 aa9.11□□□□□ -0.95
SHROOM4-203ENST00000460112 OR6A2O95222 327 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms