RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 TENM4Q6N022 2769 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 METTL3Q86U44 580 aaKnown RBP11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ZC3H3Q8IXZ2 948 aaKnown RBP11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 MLKLQ8NB16 471 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 OR6B3Q8NGW1 331 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 C1orf216Q8TAB5 229 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 OVCA2Q8WZ82 227 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 BHMTQ93088 406 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 CCDC47Q96A33 483 aaKnown RBP11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 P2RY11Q96G91 374 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 FCRL3Q96P31 734 aaPredicted RBP11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ACCSQ96QU6 501 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 XPO6Q96QU8 1125 aaKnown RBP11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 KCNK16Q96T55 309 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 FUCA2Q9BTY2 467 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 B3GNT5Q9BYG0 378 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 FGFBP2Q9BYJ0 223 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 SNX25Q9H3E2 840 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ITM2CQ9NQX7 267 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 EXOC1Q9NV70 894 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 GMIPQ9P107 970 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 MAN1B1Q9UKM7 699 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 EXOC7Q9UPT5 735 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 TRAF3IP3Q9Y228 551 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 R3HCC1Q9Y3T6 440 aaKnown RBP11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 STON1Q9Y6Q2 735 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 SHROOM3Q8TF72 1996 aa11.9□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ZNF462Q96JM2 2506 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 GCNT3O95395 438 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 CISD3P0C7P0 127 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 ZDHHC11BP0C7U3 371 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 GARTP22102 1010 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 GNL1P36915 607 aaPredicted RBP11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 EIF2S3P41091 472 aaKnown RBP11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 TUBP50607 506 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 SLC5A3P53794 718 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 STARD3Q14849 445 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 KIF19Q2TAC6 998 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 SNX30Q5VWJ9 437 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 LAYNQ6UX15 382 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 SLC9A9Q8IVB4 645 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 GOLGA5Q8TBA6 731 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 SNX19Q92543 992 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 NXPE2Q96DL1 559 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 NACA2Q9H009 215 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 KCTD10Q9H3F6 313 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 PLK2Q9NYY3 685 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 MARK1Q9P0L2 795 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 SNX11Q9Y5W9 270 aa11.89□□□□□ -0.51
PRAMEF35P-201ENST00000458709 E9PAM4 449 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 PDXKO00764 312 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 KCNK3O14649 394 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 KIAA0391O15091 583 aaKnown RBP11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 TBX18O95935 607 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 TNNC2P02585 160 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 IDEP14735 1019 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 IL12RB1P42701 662 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 GRK6P43250 576 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 SEMG2Q02383 582 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 ENPEPQ07075 957 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 SUZ12Q15022 739 aaKnown RBP11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 HTR3DQ70Z44 454 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 FAM35AQ86V20 835 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 FAM124AQ86V42 546 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 TMPRSS6Q8IU80 811 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 CBWD2Q8IUF1 395 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 SYCP3Q8IZU3 236 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 GPD1LQ8N335 351 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 B3GALNT2Q8NCR0 500 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 SIPA1Q96FS4 1042 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 DHTKD1Q96HY7 919 aaPredicted RBP11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 WDR35Q9P2L0 1181 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 CFAP46Q8IYW2 2715 aa11.88□□□□□ -0.51
PRAMEF35P-201ENST00000458709 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 J3QKU1 62 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 TGFB1I1O43294 461 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 TLR5O60602 858 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 TACC1O75410 805 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 IGLV3-19P01714 112 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 ERCC5P28715 1186 aaPredicted RBP11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 CCT8P50990 548 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 AFF3P51826 1226 aaKnown RBP11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 COPAP53621 1224 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 IL9RQ01113 521 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 LRRC63Q05C16 580 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 CAMK4Q16566 473 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 KNOP1Q1ED39 458 aaKnown RBP11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 EDRF1Q3B7T1 1238 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 CAVIN1Q6NZI2 390 aaKnown RBP11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 PCSK4Q6UW60 755 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 LRRC69Q6ZNQ3 347 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 TMPRSS12Q86WS5 348 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 LSM14AQ8ND56 463 aaKnown RBP11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 PRCCQ92733 491 aaPredicted RBP11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 BPIFA3Q9BQP9 254 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 KLF16Q9BXK1 252 aaPredicted RBP11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 IL37Q9NZH6 218 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 ANKRD6Q9Y2G4 727 aa11.87□□□□□ -0.51
PRAMEF35P-201ENST00000458709 FAM92AA1XBS5 289 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms