RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 WDTC1Q8N5D0 677 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 DENND1AQ8TEH3 1009 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 DHX33Q9H6R0 707 aaKnown RBP12.22□□□□□ -0.45
SYNE2-207ENST00000458046 BARX2Q9UMQ3 279 aaPredicted RBP12.22□□□□□ -0.45
SYNE2-207ENST00000458046 CNTN6Q9UQ52 1028 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 TMEM98Q9Y2Y6 226 aa12.22□□□□□ -0.45
SYNE2-207ENST00000458046 NFASCO94856 1347 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 WDR91A4D1P6 747 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 PLOD2O00469 737 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 VCPP55072 806 aaKnown RBP12.21□□□□□ -0.45
SYNE2-207ENST00000458046 CNTN2Q02246 1040 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 TNFAIP1Q13829 316 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 SPARCL1Q14515 664 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 TFDP3Q5H9I0 405 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 RNASEH2BQ5TBB1 312 aaKnown RBP12.21□□□□□ -0.45
SYNE2-207ENST00000458046 ITPRIPL1Q6GPH6 555 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 ABRAXAS1Q6UWZ7 409 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 RIBC1Q8N443 379 aaPredicted RBP12.21□□□□□ -0.45
SYNE2-207ENST00000458046 ZNF280CQ8ND82 737 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 TFAP2BQ92481 460 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 GRAMD1AQ96CP6 724 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 ZNF668Q96K58 619 aaPredicted RBP12.21□□□□□ -0.45
SYNE2-207ENST00000458046 RBM14Q96PK6 669 aaKnown RBP12.21□□□□□ -0.45
SYNE2-207ENST00000458046 TMEM237Q96Q45 408 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 MAK16Q9BXY0 300 aaKnown RBP12.21□□□□□ -0.45
SYNE2-207ENST00000458046 C12orf65Q9H3J6 166 aaKnown RBP12.21□□□□□ -0.45
SYNE2-207ENST00000458046 CISHQ9NSE2 258 aa12.21□□□□□ -0.45
SYNE2-207ENST00000458046 DNAAF2Q9NVR5 837 aaKnown RBP12.21□□□□□ -0.45
SYNE2-207ENST00000458046 ALOX15BO15296 676 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 TARSP26639 723 aaKnown RBP12.21□□□□□ -0.46
SYNE2-207ENST00000458046 SSTR1P30872 391 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 CDKN2BP42772 138 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 CAPSQ13938 189 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 MORF4L2Q15014 288 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 EFTUD2Q15029 972 aaKnown RBP eCLIP12.21□□□□□ -0.46
SYNE2-207ENST00000458046 OASLQ15646 514 aaKnown RBP12.21□□□□□ -0.46
SYNE2-207ENST00000458046 TLDC1Q6P9B6 456 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 CENPUQ71F23 418 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 ERICH1Q86X53 443 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 TMEM35BQ8NCS4 154 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 CCHCR1Q8TD31 782 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 TTC25Q96NG3 672 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 TACO1Q9BSH4 297 aaKnown RBP12.21□□□□□ -0.46
SYNE2-207ENST00000458046 FOXP3Q9BZS1 431 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 TJP2Q9UDY2 1190 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 HACL1Q9UJ83 578 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 HAO1Q9UJM8 370 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 AGTPBP1Q9UPW5 1226 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 CHKBQ9Y259 395 aa12.21□□□□□ -0.46
SYNE2-207ENST00000458046 ADGRA2Q96PE1 1338 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 DOCK5Q9H7D0 1870 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 H3BRJ5 948 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 BRINP1O60477 761 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 TLR5O60602 858 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 DIAPH2O60879 1101 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 UNC5CO95185 931 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 ASS1P00966 412 aaKnown RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 CALB1P05937 261 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 SRGAP2CP0DJJ0 459 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 KRT4P19013 534 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 RFC1P35251 1148 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 POLD2P49005 469 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 CLNS1AP54105 237 aaKnown RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 GDF10P55107 478 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 GPX6P59796 221 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 OSTNP61366 133 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 TFDP1Q14186 410 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 GBX1Q14549 363 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 HHATQ5VTY9 493 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 ANKRD22Q5VYY1 191 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 IL17RDQ8NFM7 739 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 RIN3Q8TB24 985 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 LRRC8CQ8TDW0 803 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 WRNIP1Q96S55 665 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 EBF2Q9HAK2 575 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 IFT80Q9P2H3 777 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 DRG1Q9Y295 367 aaKnown RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 TCRBV5S1A1TA0A578 114 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 GOLGA8RI6L899 631 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 EOMESO95936 686 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 PIGRP01833 764 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 FGFR1P11362 822 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 ALADP13716 330 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 GJA9P57773 515 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 CTAG1AP78358 180 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 TFAMQ00059 246 aaKnown RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 PPP2R5DQ14738 602 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 MSS51Q4VC12 460 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 FNBP1LQ5T0N5 605 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 DRICH1Q6PGQ1 229 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 CEP128Q6ZU80 1094 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 PRPF31Q8WWY3 499 aaKnown RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 LRRC37BQ96QE4 947 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 KLF6Q99612 283 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 ACAD9Q9H845 621 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 PICK1Q9NRD5 415 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 PPT2Q9UMR5 302 aa12.2□□□□□ -0.46
SYNE2-207ENST00000458046 NOSIPQ9Y314 301 aaKnown RBP12.2□□□□□ -0.46
SYNE2-207ENST00000458046 STARD13Q9Y3M8 1113 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms