RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 SYPL2Q5VXT5 272 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TXNRD3NBQ6F5E7 133 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 HFE2Q6ZVN8 426 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 BZW1Q7L1Q6 419 aaKnown RBP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TMC7Q7Z402 723 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 SCD5Q86SK9 330 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TTC9BQ8N6N2 239 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 STKLD1Q8NE28 680 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 HDAC7Q8WUI4 952 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 HNRNPLLQ8WVV9 542 aaKnown RBP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 ANKRD7Q92527 254 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TSC1Q92574 1164 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 HSPH1Q92598 858 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TGS1Q96RS0 853 aaKnown RBP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 HAPLN3Q96S86 360 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 CALN1Q9BXU9 219 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 ANKZF1Q9H8Y5 726 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 CYP4F11Q9HBI6 524 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 PCDH18Q9HCL0 1135 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 WDR6Q9NNW5 1121 aaKnown RBP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TLR9Q9NR96 1032 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 PIGVQ9NUD9 493 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 DONSONQ9NYP3 566 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 FZD10Q9ULW2 581 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 TLR6Q9Y2C9 796 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 UTP11Q9Y3A2 253 aaKnown RBP9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 RAD54BQ9Y620 910 aa9.26□□□□□ -0.93
CDC42EP3-204ENST00000457889 MKI67P46013 3256 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 A0A1W2PQH9 124 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 CFAP69A5D8W1 941 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 PI4K2BG5E9Z4 385 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 APOL1O14791 398 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 ADAM12O43184 909 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 CST8O60676 142 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 HEXIM1O94992 359 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 ECEL1O95672 775 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 FGF19O95750 216 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 POU2F2P09086 479 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 RHOXF2BP0C7M4 288 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 H2AFXP16104 143 aaPredicted RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 RPL17P18621 184 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 L1CAMP32004 1257 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 COILP38432 576 aaPredicted RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 MAGEA10P43363 369 aaPredicted RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 DRG2P55039 364 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 TAF10Q12962 218 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 NME3Q13232 169 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 BYSLQ13895 437 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 RAB30Q15771 203 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 TAF12Q16514 161 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 ATP13A4Q4VNC1 1196 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 PABPC1LQ4VXU2 614 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 SLC9A4Q6AI14 798 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCDC137Q6PK04 289 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 PDZD4Q76G19 769 aaPredicted RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 TAC4Q86UU9 113 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 FAM131BQ86XD5 332 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 RFX6Q8HWS3 928 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 KLHL7Q8IXQ5 586 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCDC105Q8IYK2 499 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 MRPL43Q8N983 215 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 ATL2Q8NHH9 583 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 SEC14L1Q92503 715 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 NDRG1Q92597 394 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 PSMG2Q969U7 264 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 HAUS1Q96CS2 278 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZFRQ96KR1 1074 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 RNF157Q96PX1 679 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 EPAS1Q99814 870 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 TCF25Q9BQ70 676 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 RHOXF2Q9BQY4 288 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 LRRC1Q9BTT6 524 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 PARD6BQ9BYG5 372 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 DCLK3Q9C098 648 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 DDX47Q9H0S4 455 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 LMAN2LQ9H0V9 348 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 OSBPL2Q9H1P3 480 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 CRISPLD1Q9H336 500 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 DHX35Q9H5Z1 703 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 RETREG1Q9H6L5 497 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 WDCPQ9H6R7 721 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 ENTPD7Q9NQZ7 604 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 ARHGEF38Q9NXL2 777 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 GMIPQ9P107 970 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 SLC12A6Q9UHW9 1150 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 DRG1Q9Y295 367 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 SLC27A5Q9Y2P5 690 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 HBS1LQ9Y450 684 aaKnown RBP9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 INSL5Q9Y5Q6 135 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 MYO16Q9Y6X6 1858 aa9.25□□□□□ -0.93
CDC42EP3-204ENST00000457889 MCF2LO15068 1137 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 FGF10O15520 208 aaPredicted RBP9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 RAD51CO43502 376 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 LIASO43766 372 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 CXCL14O95715 111 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms