RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 WNT8BQ93098 351 aa12.87□□□□□ -0.35
LINC00959-201ENST00000456581 ZFP42Q96MM3 310 aa12.87□□□□□ -0.35
LINC00959-201ENST00000456581 BTBD10Q9BSF8 475 aa12.87□□□□□ -0.35
LINC00959-201ENST00000456581 DHRS4Q9BTZ2 278 aa12.87□□□□□ -0.35
LINC00959-201ENST00000456581 FCHO1O14526 889 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 SMIM24O75264 130 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 CTSHP09668 335 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 VDRP11473 427 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 ETV4P43268 484 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 CAP1Q01518 475 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 INCA1Q0VD86 236 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 THOC5Q13769 683 aaKnown RBP12.86□□□□□ -0.35
LINC00959-201ENST00000456581 DPYSL3Q14195 570 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 FSCN1Q16658 493 aaKnown RBP12.86□□□□□ -0.35
LINC00959-201ENST00000456581 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 SOWAHAQ2M3V2 549 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 CXCL17Q6UXB2 119 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00959-201ENST00000456581 UNC5BQ8IZJ1 945 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 VPS52Q8N1B4 723 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 CLEC4CQ8WTT0 213 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 MCUR1Q96AQ8 359 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 SKA1Q96BD8 255 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 PGLYRP2Q96PD5 576 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 SHCBP1LQ9BZQ2 653 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 CYP3A43Q9HB55 503 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 SMYD2Q9NRG4 433 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 KRT82Q9NSB4 513 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 SENP1Q9P0U3 644 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 SMIM28A0A1B0GU29 152 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.86□□□□□ -0.35
LINC00959-201ENST00000456581 SMIM35A0A1B0GVV1 85 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 E2F8A0AVK6 867 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 NVLO15381 856 aaKnown RBP12.86□□□□□ -0.35
LINC00959-201ENST00000456581 CCDC130P13994 396 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 CD1EP15812 388 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 TFE3P19532 575 aaPredicted RBP12.86□□□□□ -0.35
LINC00959-201ENST00000456581 ZBTB6Q15916 424 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 DCAF4L1Q3SXM0 396 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 DARS2Q6PI48 645 aaKnown RBP12.86□□□□□ -0.35
LINC00959-201ENST00000456581 PDIK1LQ8N165 341 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 TEKT4Q8WW24 435 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 CYTH2Q99418 400 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 FOXP3Q9BZS1 431 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 MIS12Q9H081 205 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00959-201ENST00000456581 STRIP2Q9ULQ0 834 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 HEY1Q9Y5J3 304 aa12.86□□□□□ -0.35
LINC00959-201ENST00000456581 TRIM49D1C9J1S8 452 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 HAS3O00219 553 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 P4HA1P13674 534 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 PHBP35232 272 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 RABGGTBP53611 331 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 PRKD1Q15139 912 aaPredicted RBP12.85□□□□□ -0.35
LINC00959-201ENST00000456581 UBXN11Q5T124 520 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 ARMC3Q5W041 872 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 C9orf57Q5W0N0 161 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 ARID3BQ8IVW6 561 aaPredicted RBP12.85□□□□□ -0.35
LINC00959-201ENST00000456581 NSL1Q96IY1 281 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 AP5M1Q9H0R1 490 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 PLAC1Q9HBJ0 212 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 GABRQQ9UN88 632 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 TRAFD1O14545 582 aaPredicted RBP12.85□□□□□ -0.35
LINC00959-201ENST00000456581 INHBAP08476 426 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 ESRRAP11474 423 aaPredicted RBP12.85□□□□□ -0.35
LINC00959-201ENST00000456581 ADORA2BP29275 332 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 PEX6Q13608 980 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 OR52E8Q6IFG1 317 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 RGMBQ6NW40 437 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 TRMT10BQ6PF06 316 aaKnown RBP12.85□□□□□ -0.35
LINC00959-201ENST00000456581 ALKAL1Q6UXT8 129 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 MPP5Q8N3R9 675 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 RXFP2Q8WXD0 754 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 NDRG1Q92597 394 aaKnown RBP12.85□□□□□ -0.35
LINC00959-201ENST00000456581 MCRS1Q96EZ8 462 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 FAM161BQ96MY7 647 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 SRPK1Q96SB4 655 aaKnown RBP12.85□□□□□ -0.35
LINC00959-201ENST00000456581 RAB6BQ9NRW1 208 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 IKBKGQ9Y6K9 419 aa12.85□□□□□ -0.35
LINC00959-201ENST00000456581 CCDC22O60826 627 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 HMGCRP04035 888 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 GRIA1P42261 906 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 SERPINB4P48594 390 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 RASSF2P50749 326 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 SLC18A1P54219 525 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 ATXN1P54253 815 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 CDH6P55285 790 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 CDK16Q00536 496 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 PURAQ00577 322 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 TAP1Q03518 808 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 UBAP2LQ14157 1087 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 RASA2Q15283 850 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 WASHC2DQ5SRD0 308 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 LRRC38Q5VT99 294 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 LCLAT1Q6UWP7 414 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 SH2D5Q6ZV89 423 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 BBS12Q6ZW61 710 aa12.84□□□□□ -0.35
LINC00959-201ENST00000456581 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
LINC00959-201ENST00000456581 ZNF784Q8NCA9 323 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms