RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, human

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM2-215	ENST00000456545	SIK3	Q9Y2K2	1263 aa		18.84	■□□□□ 0.61
PDLIM2-215	ENST00000456545		A0A0A0MRY4	1105 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CACNG3	O60359	315 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SERPINC1	P01008	464 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	HOXD11	P31277	338 aa	Predicted RBP	18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	GBP1	P32455	592 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CDK17	Q00537	523 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	DCAF6	Q58WW2	860 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	EMC10	Q5UCC4	262 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SDE2	Q6IQ49	451 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TOGARAM2	Q6ZUX3	1019 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	BEND5	Q7L4P6	421 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	LONP2	Q86WA8	852 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ERICH1	Q86X53	443 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CAMKK1	Q8N5S9	505 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	DQX1	Q8TE96	717 aa	Known RBP	18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TMA16	Q96EY4	203 aa	Known RBP	18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ERGIC2	Q96RQ1	377 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	HINFP	Q9BQA5	517 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	RAB23	Q9ULC3	237 aa		18.83	■□□□□ 0.6
PDLIM2-215	ENST00000456545	PRR23A	A6NEV1	266 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	GOLGA6L19	H0YKK7	550 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545		K7ESF4	209 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TRIM24	O15164	1050 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	KLF8	O95600	359 aa	Predicted RBP	18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	LATS1	O95835	1130 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FYN	P06241	537 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	GLI1	P08151	1106 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	MME	P08473	750 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	PXN	P49023	591 aa	Predicted RBP	18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ZNF445	P59923	1031 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	RING1	Q06587	406 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	EOGT	Q5NDL2	527 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ADGRF1	Q5T601	910 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SYPL2	Q5VXT5	272 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FAM183BP	Q6ZVS7	135 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ASCL5	Q7RTU5	278 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TRMT11	Q7Z4G4	463 aa	Known RBP	18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	NOP9	Q86U38	636 aa	Known RBP	18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ZNF677	Q86XU0	584 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ALLC	Q8N6M5	410 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TERB1	Q8NA31	727 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TXNDC5	Q8NBS9	432 aa	Known RBP	18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ADAM32	Q8TC27	787 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	NELL1	Q92832	810 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	RNF34	Q969K3	372 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	C18orf8	Q96DM3	657 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	HHIP	Q96QV1	700 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	HSD3B7	Q9H2F3	369 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	POLR3B	Q9NW08	1133 aa	Predicted RBP	18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TJP2	Q9UDY2	1190 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLC12A6	Q9UHW9	1150 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TLR6	Q9Y2C9	796 aa		18.82	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TYW5	A2RUC4	315 aa	Known RBP	18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	EPHB6	O15197	1021 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ACSL4	O60488	711 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	HSF2BP	O75031	334 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	GRAP2	O75791	330 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	APOE	P02649	317 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ERBB2	P04626	1255 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TDGF1	P13385	188 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CNR2	P34972	360 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	RNASE9	P60153	205 aa	Known RBP	18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLC6A3	Q01959	620 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ARID5A	Q03989	594 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	DMWD	Q09019	674 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	MESP2	Q0VG99	397 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TAF5	Q15542	800 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	HSF5	Q4G112	596 aa	Predicted RBP	18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	PRR23B	Q6ZRT6	265 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CEP68	Q76N32	757 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ZDHHC17	Q8IUH5	632 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SFTPA1	Q8IWL2	248 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	DEFB106A	Q8N104	65 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ZNF513	Q8N8E2	541 aa	Predicted RBP	18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TSTD1	Q8NFU3	115 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	KCNV2	Q8TDN2	545 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FUCA2	Q9BTY2	467 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FAM204A	Q9H8W3	233 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ASNSD1	Q9NWL6	643 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	MMP17	Q9ULZ9	603 aa		18.81	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SYNJ2BP-COX16	A0A087WUM0	186 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FAM170A	A1A519	330 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ZBTB24	O43167	697 aa	Predicted RBP	18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	LILRB5	O75023	590 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ALDH1A2	O94788	518 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	APBB3	O95704	486 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	LSM8	O95777	96 aa	Known RBP	18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CAVIN2	O95810	425 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TRUB2	O95900	331 aa	Known RBP	18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	MOCS2	O96007	188 aa	Predicted RBP	18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CCDC172	P0C7W6	258 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	HOXA6	P31267	233 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	JAM2	P57087	298 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	NNT	Q13423	1086 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	PTPN20	Q4JDL3	420 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FYB2	Q5VWT5	728 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	APTX	Q7Z2E3	356 aa	Known RBP	18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TAC4	Q86UU9	113 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	WDR5B	Q86VZ2	330 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms