RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 CD248Q9HCU0 757 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 MARK1Q9P0L2 795 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 WDR35Q9P2L0 1181 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 ANGPTL2Q9UKU9 493 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 CLEC4EQ9ULY5 219 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 USP3Q9Y6I4 520 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 CKAP5Q14008 2032 aa13.55□□□□□ -0.24
TREX1-203ENST00000456089 USP24Q9UPU5 2620 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 PES1O00541 588 aaKnown RBP13.54□□□□□ -0.24
TREX1-203ENST00000456089 TOP3BO95985 862 aaKnown RBP13.54□□□□□ -0.24
TREX1-203ENST00000456089 CALCAP01258 141 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 CFIP05156 583 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 RALAP11233 206 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 VDRP11473 427 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 SPINK2P20155 84 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 ERCC5P28715 1186 aaPredicted RBP13.54□□□□□ -0.24
TREX1-203ENST00000456089 PSEN1P49768 467 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 ST3GAL2Q16842 350 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 DPCR1Q3MIW9 517 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 PREPLQ4J6C6 727 aaPredicted RBP13.54□□□□□ -0.24
TREX1-203ENST00000456089 LYSMD4Q5XG99 296 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 ARHGAP17Q68EM7 881 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 KLHDC10Q6PID8 442 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 RRAGAQ7L523 313 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 DENND1CQ8IV53 801 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 ANKRD52Q8NB46 1076 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 OR2I1PQ8NGU4 316 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 FAM81BQ96LP2 452 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 ULBP1Q9BZM6 244 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 INTS2Q9H0H0 1204 aaKnown RBP13.54□□□□□ -0.24
TREX1-203ENST00000456089 THAP9Q9H5L6 903 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 STARD13Q9Y3M8 1113 aa13.54□□□□□ -0.24
TREX1-203ENST00000456089 IGHV1OR15-9A0A0B4J2B8 117 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 SLC12A8A0AV02 714 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 MBD3O95983 291 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 PAEPP09466 180 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 KRT5P13647 590 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 PRKCSHP14314 528 aaPredicted RBP13.53□□□□□ -0.24
TREX1-203ENST00000456089 ENGP17813 658 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 TKTL1P51854 596 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 BCAT1P54687 386 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 YWHAGP61981 247 aaKnown RBP eCLIP13.53□□□□□ -0.24
TREX1-203ENST00000456089 GCNT1Q02742 428 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 PDE4CQ08493 712 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 ZNF252P-AS1Q0IIN9 211 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 GEN1Q17RS7 908 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 CT47A1Q5JQC4 288 aaPredicted RBP13.53□□□□□ -0.24
TREX1-203ENST00000456089 DAB2IPQ5VWQ8 1189 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 FYB2Q5VWT5 728 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 SASS6Q6UVJ0 657 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 KIAA1324Q6UXG2 1013 aaKnown RBP13.53□□□□□ -0.24
TREX1-203ENST00000456089 GBP6Q6ZN66 633 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 NUDT18Q6ZVK8 323 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 RSRC2Q7L4I2 434 aaKnown RBP13.53□□□□□ -0.24
TREX1-203ENST00000456089 SYT12Q8IV01 421 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 SLC41A1Q8IVJ1 513 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 ARHGAP18Q8N392 663 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 DEFB124Q8NES8 71 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 UBA3Q8TBC4 463 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 KCNV2Q8TDN2 545 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 CDK5RAP1Q96SZ6 601 aaKnown RBP13.53□□□□□ -0.24
TREX1-203ENST00000456089 UBXN6Q9BZV1 441 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 LRRC4Q9HBW1 653 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 UBE2TQ9NPD8 197 aaPredicted RBP13.53□□□□□ -0.24
TREX1-203ENST00000456089 CLIC5Q9NZA1 410 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 MARCH2Q9P0N8 246 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 PILRBQ9UKJ0 227 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 TSPAN16Q9UKR8 245 aa13.53□□□□□ -0.24
TREX1-203ENST00000456089 AGO1Q9UL18 857 aaKnown RBP13.53□□□□□ -0.24
TREX1-203ENST00000456089 MUC22E2RYF6 1773 aaPredicted RBP13.53□□□□□ -0.24
TREX1-203ENST00000456089 PCNX2A6NKB5 2137 aa13.52□□□□□ -0.24
TREX1-203ENST00000456089 NUMA1Q14980 2115 aa13.52□□□□□ -0.24
TREX1-203ENST00000456089 PIK3R2O00459 728 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 TSPAN3O60637 253 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 TPM2P07951 284 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 MFAP3P55082 362 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 BST2Q10589 180 aaKnown RBP13.52□□□□□ -0.25
TREX1-203ENST00000456089 FOXC1Q12948 553 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.25
TREX1-203ENST00000456089 STILQ15468 1287 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 RAB41Q5JT25 222 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 SDE2Q6IQ49 451 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 ENOSF1Q7L5Y1 443 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 BHLHA9Q7RTU4 235 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 CACUL1Q86Y37 369 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 RBBP8NLQ8NC74 664 aaPredicted RBP13.52□□□□□ -0.25
TREX1-203ENST00000456089 LMO3Q8TAP4 145 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 GPT2Q8TD30 523 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 SORCS1Q8WY21 1168 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 EDEM1Q92611 657 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 MRGPRX1Q96LB2 322 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 GABRG3Q99928 467 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 CRACR2AQ9BSW2 395 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 GTPBP2Q9BX10 602 aaKnown RBP13.52□□□□□ -0.25
TREX1-203ENST00000456089 NUSAP1Q9BXS6 441 aaKnown RBP13.52□□□□□ -0.25
TREX1-203ENST00000456089 EVLQ9UI08 416 aaPredicted RBP13.52□□□□□ -0.25
TREX1-203ENST00000456089 FBXO10Q9UK96 956 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 STON1Q9Y6Q2 735 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 TMEM131Q92545 1883 aa13.52□□□□□ -0.25
TREX1-203ENST00000456089 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms