RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 NRG1Q02297 640 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-206ENST00000454852 SMAD4Q13485 552 aaKnown RBP11.7□□□□□ -0.54
TRAF4-206ENST00000454852 HADHQ16836 314 aaKnown RBP11.7□□□□□ -0.54
TRAF4-206ENST00000454852 GPR158Q5T848 1215 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 MEI1Q5TIA1 1274 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 NUGGCQ68CJ6 796 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 POTEHQ6S545 545 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 SND1Q7KZF4 910 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAF4-206ENST00000454852 PEX26Q7Z412 305 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 VSIG1Q86XK7 387 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 DDX42Q86XP3 938 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAF4-206ENST00000454852 UNC45BQ8IWX7 931 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 NPAS3Q8IXF0 933 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 RHOT1Q8IXI2 618 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 MAB21L3Q8N8X9 362 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 ITFG1Q8TB96 612 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 FGF13Q92913 245 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 KIF9Q9HAQ2 790 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 OBP2AQ9NY56 170 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 SFMBT1Q9UHJ3 866 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 RASAL2Q9UJF2 1139 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 STOML2Q9UJZ1 356 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 NUDT5Q9UKK9 219 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 AMFRQ9UKV5 643 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 USP18Q9UMW8 372 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 USTQ9Y2C2 406 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 PCDHA3Q9Y5H8 950 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 SLC12A8A0AV02 714 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 ESPNB1AK53 854 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 ZNF487B1APH4 448 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 SPOPO43791 374 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 PRPSAP2O60256 369 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 STC2O76061 302 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 MBL2P11226 248 aaPredicted RBP11.69□□□□□ -0.54
TRAF4-206ENST00000454852 GJA1P17302 382 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 IL1R2P27930 398 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 ADRA1BP35368 520 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 AVPR1AP37288 418 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 PEX5P50542 639 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 ZNF135P52742 658 aaPredicted RBP11.69□□□□□ -0.54
TRAF4-206ENST00000454852 TAS2R40P59535 323 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 CDO1Q16878 200 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 ARL13BQ3SXY8 428 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 LEXMQ3ZCV2 418 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 RAB6CQ53S08 254 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 ZNF569Q5MCW4 686 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 STXBP5Q5T5C0 1151 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 CPNE8Q86YQ8 564 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 KATNAL2Q8IYT4 538 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 SLC35F6Q8N357 371 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 ARL14EPQ8N8R7 260 aaPredicted RBP11.69□□□□□ -0.54
TRAF4-206ENST00000454852 ADAM32Q8TC27 787 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 ADAMTS19Q8TE59 1207 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 HLA-CQ95604 372 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 C1orf74Q96LT6 269 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 HAPLN3Q96S86 360 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 PEBP4Q96S96 227 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 CYP2S1Q96SQ9 504 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 TLR10Q9BXR5 811 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 DCLK3Q9C098 648 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 NACA2Q9H009 215 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 RAB6CQ9H0N0 254 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 OSBPL2Q9H1P3 480 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 GOLPH3Q9H4A6 298 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 WDCPQ9H6R7 721 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 TRPC7Q9HCX4 862 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 CDH7Q9ULB5 785 aa11.69□□□□□ -0.54
TRAF4-206ENST00000454852 USP15Q9Y4E8 981 aaPredicted RBP11.69□□□□□ -0.54
TRAF4-206ENST00000454852 I6L893 689 aaPredicted RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 DDX3YO15523 660 aaKnown RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 MSI1O43347 362 aaKnown RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 MBTPS2O43462 519 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 APOEP02649 317 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 CKMP06732 381 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 RARAP10276 462 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 TCF4P15884 667 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 PRLRP16471 622 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 HTR7P34969 479 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 ARSEP51690 589 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 ATXN1P54253 815 aaKnown RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 GNG11P61952 73 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 ZXDBP98169 803 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 USP4Q13107 963 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 SEMA3BQ13214 749 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 NME3Q13232 169 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 CBX2Q14781 532 aaPredicted RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 DPYSL2Q16555 572 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 TAZQ16635 292 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 PUS10Q3MIT2 529 aaKnown RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 ZC3H12AQ5D1E8 599 aaKnown RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 ERMARDQ5T6L9 678 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 Q6ZNB5 142 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 HTR3DQ70Z44 454 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 FAM131BQ86XD5 332 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 MIB1Q86YT6 1006 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 FAM217AQ8IXS0 508 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 CCDC185Q8N715 623 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 SMARCD2Q92925 531 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 USP13Q92995 863 aaPredicted RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 E2F7Q96AV8 911 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms