RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 GNEQ9Y223 722 aaKnown RBP17.72■□□□□ 0.43
SCUBE2-202ENST00000450649 TRDMT1O14717 391 aaKnown RBP17.72■□□□□ 0.43
SCUBE2-202ENST00000450649 USP41Q3LFD5 358 aa17.72■□□□□ 0.43
SCUBE2-202ENST00000450649 VWA5B1Q5TIE3 1220 aa17.72■□□□□ 0.43
SCUBE2-202ENST00000450649 NPNTQ6UXI9 565 aa17.72■□□□□ 0.43
SCUBE2-202ENST00000450649 RMDN3Q96TC7 470 aa17.72■□□□□ 0.43
SCUBE2-202ENST00000450649 SLC38A10Q9HBR0 1119 aa17.72■□□□□ 0.43
SCUBE2-202ENST00000450649 RAB6BQ9NRW1 208 aa17.72■□□□□ 0.43
SCUBE2-202ENST00000450649 ARHGAP26Q9UNA1 814 aa17.72■□□□□ 0.43
SCUBE2-202ENST00000450649 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 TMEM221A6NGB7 291 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 H0YCG3 227 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 CHADO15335 359 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 FAM189A1O60320 539 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 TRPA1O75762 1119 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 DGAT1O75907 488 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 STBD1O95210 358 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 FGF3P11487 239 aaPredicted RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 ABCD1P33897 745 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 NLRP11P59045 1033 aaKnown RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 ROR1Q01973 937 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 AMIGO2Q86SJ2 522 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 KIAA0319LQ8IZA0 1049 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 KCTD6Q8NC69 237 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 RIN3Q8TB24 985 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 XPNPEP1Q9NQW7 623 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 PXMP2Q9NR77 195 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 GABBR1Q9UBS5 961 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 HEMK1Q9Y5R4 338 aaPredicted RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 TESPA1A2RU30 521 aaPredicted RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 WDR46O15213 610 aaKnown RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 APOEP02649 317 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 KCNA4P22459 653 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 TBXAS1P24557 533 aaPredicted RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 ACAT1P24752 427 aaKnown RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 CLCN2P51788 898 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 HADHQ16836 314 aaKnown RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 POTEAQ6S8J7 498 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 ATG14Q6ZNE5 492 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 TMEM35BQ8NCS4 154 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 ATP6V0A1Q93050 837 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 TRIM56Q9BRZ2 755 aaKnown RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 ZNF341Q9BYN7 854 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 TMEM39BQ9GZU3 492 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 DHX33Q9H6R0 707 aaKnown RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 PCSK1NQ9UHG2 260 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 DCXO43602 365 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 DKC1O60832 514 aaKnown RBP eCLIP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 STAM2O75886 525 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 COX4I1P13073 169 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 VARSP26640 1264 aaKnown RBP17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 ADGRE1Q14246 886 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 WDR78Q5VTH9 848 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 FKBP1CQ5VVH2 108 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 SCARA3Q6AZY7 606 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 DNAJC28Q9NX36 388 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 ZNF711Q9Y462 761 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 STYXL1Q9Y6J8 313 aa17.71■□□□□ 0.43
SCUBE2-202ENST00000450649 OSBPP22059 807 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 LIG4P49917 911 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 MRPS22P82650 360 aaKnown RBP17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 CDKL1Q00532 357 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 TAF5Q15542 800 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 ZNF394Q53GI3 561 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 FAXCQ5TGI0 409 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 RSBN1LQ6PCB5 846 aaPredicted RBP17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 TRMT10BQ6PF06 316 aaKnown RBP17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 TICAM1Q8IUC6 712 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 WDTC1Q8N5D0 677 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 JOSD2Q8TAC2 188 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 CALN1Q9BXU9 219 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 ZNF541Q9H0D2 1346 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 A0A1B0GTW7 788 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 E9PBE3 544 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 LSM8O95777 96 aaKnown RBP17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 MYL4P12829 197 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 GABRB2P47870 512 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 ZNF132P52740 706 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 GPAT2Q6NUI2 795 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 BBS5Q8N3I7 341 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 LPAR1Q92633 364 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 FAIMQ9NVQ4 179 aa17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 RSL24D1Q9UHA3 163 aaKnown RBP17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 PAIP2BQ9ULR5 123 aaKnown RBP17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 FAF1Q9UNN5 650 aaPredicted RBP17.7■□□□□ 0.42
SCUBE2-202ENST00000450649 BOLA2-SMG1P6H3BVE0 249 aa17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 SLC44A4Q53GD3 710 aa17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 UNC5AQ6ZN44 842 aa17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 CAND1Q86VP6 1230 aaKnown RBP17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 ERI1Q8IV48 349 aaKnown RBP17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 GALNT4Q8N4A0 578 aa17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 HSPH1Q92598 858 aa17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 COPS7BQ9H9Q2 264 aaPredicted RBP17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 LIN28AQ9H9Z2 209 aaKnown RBP17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 PCDH18Q9HCL0 1135 aa17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 STK39Q9UEW8 545 aa17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 RIMS3Q9UJD0 308 aa17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 AGO2Q9UKV8 859 aaKnown RBP17.69■□□□□ 0.42
SCUBE2-202ENST00000450649 EMCNQ9ULC0 261 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms