RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 RWDD2BP57060 319 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 TBX4P57082 545 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 ZNF211Q13398 564 aaPredicted RBP15.21■□□□□ 0.03
TNF-208ENST00000449264 TEAD2Q15562 447 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 ZC3H12AQ5D1E8 599 aaKnown RBP15.21■□□□□ 0.03
TNF-208ENST00000449264 DCAF12L1Q5VU92 463 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 TMEM184AQ6ZMB5 413 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 CYP4V2Q6ZWL3 525 aaPredicted RBP15.21■□□□□ 0.03
TNF-208ENST00000449264 Q7L0L9 218 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 POLNQ7Z5Q5 900 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 ARL14EPQ8N8R7 260 aaPredicted RBP15.21■□□□□ 0.03
TNF-208ENST00000449264 CMASQ8NFW8 434 aaPredicted RBP15.21■□□□□ 0.03
TNF-208ENST00000449264 ING5Q8WYH8 240 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 OSBPL9Q96SU4 736 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 RNF38Q9H0F5 515 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 TKTL2Q9H0I9 626 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 WDCPQ9H6R7 721 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.21■□□□□ 0.03
TNF-208ENST00000449264 SMPD4Q9NXE4 827 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 SAR1BQ9Y6B6 198 aa15.21■□□□□ 0.03
TNF-208ENST00000449264 C5orf42Q9H799 3197 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 LRRD1A4D1F6 860 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 PI4K2BG5E9Z4 385 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 IRF1P10914 325 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 CCR1P32246 355 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 CXCR3P49682 368 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 PEX5P50542 639 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 ADAM15Q13444 863 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 ARHGAP15Q53QZ3 475 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 GPR158Q5T848 1215 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 LRRC38Q5VT99 294 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 PAPD7Q5XG87 772 aaKnown RBP15.2■□□□□ 0.02
TNF-208ENST00000449264 KLHDC10Q6PID8 442 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 SYCE2Q6PIF2 218 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 CCDC50Q8IVM0 306 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 KATNAL2Q8IYT4 538 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 TTC16Q8NEE8 873 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 CAPZA3Q96KX2 299 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 CYP2S1Q96SQ9 504 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 AP4E1Q9UPM8 1137 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 TLR6Q9Y2C9 796 aa15.2■□□□□ 0.02
TNF-208ENST00000449264 MRPS23Q9Y3D9 190 aaKnown RBP15.2■□□□□ 0.02
TNF-208ENST00000449264 XIRP2A4UGR9 3374 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 TRAV19A0A0A6YYK7 116 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 ZNF185O15231 689 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 MOSPD3O75425 235 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 APOEP02649 317 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 CEBPBP17676 345 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 HDCP19113 662 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 POU3F3P20264 500 aaPredicted RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 AMPD2Q01433 879 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 DLX2Q07687 328 aaPredicted RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 KRT81Q14533 505 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 LLGL1Q15334 1064 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 TRIP4Q15650 581 aaPredicted RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 CA9Q16790 459 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 ARL13BQ3SXY8 428 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 BOLA3Q53S33 107 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 EFHC2Q5JST6 749 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 PRSS36Q5K4E3 855 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 ERMARDQ5T6L9 678 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 AADACL2Q6P093 401 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 ZNF276Q8N554 614 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 COG1Q8WTW3 980 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 RNF25Q96BH1 459 aaPredicted RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 FCRL2Q96LA5 508 aaPredicted RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 DHX35Q9H5Z1 703 aaKnown RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 ANLNQ9NQW6 1124 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 DDX56Q9NY93 547 aaKnown RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 CLEC1BQ9P126 229 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 FZD10Q9ULW2 581 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 SPTBN5Q9NRC6 3674 aaKnown RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 ZNF197O14709 1029 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 TCP1P17987 556 aaKnown RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 GGCXP38435 758 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 KCNQ1P51787 676 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 CDH6P55285 790 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 NNTQ13423 1086 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 EIF4EBP2Q13542 120 aaPredicted RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 CLUL1Q15846 466 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 PPP6R3Q5H9R7 873 aaPredicted RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 BRMS1LQ5PSV4 323 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 SEL1L2Q5TEA6 688 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 GPR149Q86SP6 731 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 KCTD6Q8NC69 237 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 ITFG1Q8TB96 612 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 TEKT4Q8WW24 435 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 MYLIPQ8WY64 445 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 RAPGEF5Q92565 580 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 NTAN1Q96AB6 310 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 MAGEB5Q9BZ81 275 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 CARD9Q9H257 536 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 HBS1LQ9Y450 684 aaKnown RBP15.19■□□□□ 0.02
TNF-208ENST00000449264 CPQQ9Y646 472 aa15.19■□□□□ 0.02
TNF-208ENST00000449264 I6L893 689 aaPredicted RBP15.18■□□□□ 0.02
TNF-208ENST00000449264 CEP104O60308 925 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 ZRANB2O95218 330 aaKnown RBP eCLIP15.18■□□□□ 0.02
TNF-208ENST00000449264 OLFM2O95897 454 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 CD48P09326 243 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms