RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 CENPUQ71F23 418 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 PDZD4Q76G19 769 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 FAM131BQ86XD5 332 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 NPAS4Q8IUM7 802 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 PQLC3Q8N755 202 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 OR10T2Q8NGX3 314 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 OR2W6PQ8NHA6 318 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 SLC7A14Q8TBB6 771 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 ZBTB9Q96C00 473 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 PGM2Q96G03 612 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 CSPG4P5Q96PW8 444 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 KCTD15Q96SI1 283 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 RBM15Q96T37 977 aaKnown RBP eCLIP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 FRMD8Q9BZ67 464 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 ZCWPW1Q9H0M4 648 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 ADAM7Q9H2U9 754 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 EPB41L4BQ9H329 900 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 CENPHQ9H3R5 247 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 AAASQ9NRG9 546 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 ADAM28Q9UKQ2 775 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 USP3Q9Y6I4 520 aa10.96□□□□□ -0.65
VIPAS39-203ENST00000448935 PCNTO95613 3336 aa10.96□□□□□ -0.66
VIPAS39-203ENST00000448935 YJEFN3A6XGL0 299 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 E7ENQ6 273 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 NRP1O14786 923 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 CXCL10P02778 98 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ABHD2P08910 425 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ZSCAN5DPP0CG00 497 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 NR1D1P20393 614 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 RPL22P35268 128 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 CHKAP35790 457 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 LMAN1P49257 510 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 CTCFP49711 727 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 CACNA2D1P54289 1103 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ARL4CP56559 192 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 SKOR1P84550 965 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 SMARCB1Q12824 385 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 NME3Q13232 169 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 KCTD19Q17RG1 926 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 SYPL2Q5VXT5 272 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ZNF280DQ6N043 979 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 SLC39A5Q6ZMH5 540 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 GPRIN1Q7Z2K8 1008 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ZC3H18Q86VM9 953 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 UNC45BQ8IWX7 931 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 CCDC185Q8N715 623 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 GLIS1Q8NBF1 620 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 RTP4Q96DX8 246 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 CASD1Q96PB1 797 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 HIPK3Q9H422 1215 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 MTMR10Q9NXD2 777 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 BCCIPQ9P287 314 aaKnown RBP eCLIP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 NAALADL1Q9UQQ1 740 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 PRG3Q9Y2Y8 225 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 HEY1Q9Y5J3 304 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 RAD54BQ9Y620 910 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 COL4A4P53420 1690 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 RASGRF2O14827 1237 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 RGS16O15492 202 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 AGTP01019 485 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 FYNP06241 537 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 HOXB1P14653 301 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ETS1P14921 441 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 CYP2C18P33260 490 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ADRA1BP35368 520 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 GRIK1P39086 918 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 MAGEA4P43358 317 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 MAGEA11P43364 429 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 HCAR3P49019 387 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ATXN1P54253 815 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 GDF10P55107 478 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ELOAQ14241 798 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 STAT4Q14765 748 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 GPNMBQ14956 572 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 MTFR1Q15390 333 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 SLC39A12Q504Y0 691 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 OTUD1Q5VV17 481 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 BSPRYQ5W0U4 402 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 KCTD16Q68DU8 428 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 NPNTQ6UXI9 565 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 HFE2Q6ZVN8 426 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 LRRTM3Q86VH5 581 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ARHGAP18Q8N392 663 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 FAM71DQ8N9W8 422 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 RNF139Q8WU17 664 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 NDRG1Q92597 394 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 PRCCQ92733 491 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 SERPINB12Q96P63 405 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 FBXO44Q9H4M3 255 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 PPCSQ9HAB8 311 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ABCC13Q9NSE7 274 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 TMLHEQ9NVH6 421 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 DDIT4Q9NX09 232 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 CWC15Q9P013 229 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 DNAJB4Q9UDY4 337 aa10.95□□□□□ -0.66
VIPAS39-203ENST00000448935 FBXW11Q9UKB1 542 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms