RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TNFRSF10BO14763 440 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 TADA2AO75478 443 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 AGTP01019 485 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 GATMP50440 423 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 PPP2R2AP63151 447 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 GNGT1P63211 74 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 BASP1P80723 227 aaKnown RBP18.35■□□□□ 0.53
LMNA-208ENST00000448611 HIF1AQ16665 826 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 SLC45A4Q5BKX6 768 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 SCAMP5Q8TAC9 235 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 TTC25Q96NG3 672 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 SERPINB12Q96P63 405 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 TMEM106CQ9BVX2 250 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 DDIT4Q9NX09 232 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 MFHAS1Q9Y4C4 1052 aa18.35■□□□□ 0.53
LMNA-208ENST00000448611 SYN3O14994 580 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 F9P00740 461 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 AMHP03971 560 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 ACTN2P35609 894 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 IFI35P80217 286 aaPredicted RBP18.34■□□□□ 0.53
LMNA-208ENST00000448611 DPYSQ14117 519 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 TTC19Q6DKK2 380 aaPredicted RBP18.34■□□□□ 0.53
LMNA-208ENST00000448611 KCNT2Q6UVM3 1135 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 BEND5Q7L4P6 421 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 LRRN4Q8WUT4 740 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 OLFM3Q96PB7 478 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 QKIQ96PU8 341 aaKnown RBP eCLIP18.34■□□□□ 0.53
LMNA-208ENST00000448611 COLEC11Q9BWP8 271 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 XPO7Q9UIA9 1087 aaKnown RBP18.34■□□□□ 0.53
LMNA-208ENST00000448611 ADAM28Q9UKQ2 775 aa18.34■□□□□ 0.53
LMNA-208ENST00000448611 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.33■□□□□ 0.53
LMNA-208ENST00000448611 E7ESA3 106 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 DGKIO75912 1065 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 GRIK1P39086 918 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 MDH1P40925 334 aaKnown RBP18.33■□□□□ 0.53
LMNA-208ENST00000448611 CXCR3P49682 368 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 SLC5A3P53794 718 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 ARL4CP56559 192 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 GUCY1A3Q02108 690 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 PDIA2Q13087 525 aaKnown RBP18.33■□□□□ 0.53
LMNA-208ENST00000448611 SEMA3BQ13214 749 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 KCNJ11Q14654 390 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 VARS2Q5ST30 1063 aaKnown RBP18.33■□□□□ 0.53
LMNA-208ENST00000448611 FNBP1LQ5T0N5 605 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 RFX8Q6ZV50 586 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 ANKRD33Q7Z3H0 272 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 ZBED8Q8IZ13 594 aa18.33■□□□□ 0.53
LMNA-208ENST00000448611 DCP1BQ8IZD4 617 aaKnown RBP18.33■□□□□ 0.53
LMNA-208ENST00000448611 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.33■□□□□ 0.532e-6■■□□□ 12.2
LMNA-208ENST00000448611 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.33■□□□□ 0.53
LMNA-208ENST00000448611 SF3B1O75533 1304 aaKnown RBP eCLIP18.33■□□□□ 0.521e-6■■■■■ 97
LMNA-208ENST00000448611 MKI67P46013 3256 aaKnown RBP18.33■□□□□ 0.52
LMNA-208ENST00000448611 EIF3HO15372 352 aaKnown RBP eCLIP18.33■□□□□ 0.52
LMNA-208ENST00000448611 CREB3O43889 395 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 GJA8P48165 433 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 MRPL58Q14197 206 aaKnown RBP18.33■□□□□ 0.52
LMNA-208ENST00000448611 STAT4Q14765 748 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 MSS51Q4VC12 460 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 HP1BP3Q5SSJ5 553 aaPredicted RBP18.33■□□□□ 0.52
LMNA-208ENST00000448611 FAM182AQ5T1J6 154 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 CCDC13Q8IYE1 715 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 SCLYQ96I15 445 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 TRIM62Q9BVG3 475 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 CRISPLD2Q9H0B8 497 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 LRFN2Q9ULH4 789 aa18.33■□□□□ 0.52
LMNA-208ENST00000448611 A0A087WUV0 522 aaPredicted RBP18.32■□□□□ 0.52
LMNA-208ENST00000448611 ERICH4A6NGS2 130 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 FAM72CH0Y354 149 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 EEF2KO00418 725 aaKnown RBP18.32■□□□□ 0.52
LMNA-208ENST00000448611 CHADO15335 359 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 MFSD11O43934 449 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 BANF1O75531 89 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 CXCL10P02778 98 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 MNX1P50219 401 aaPredicted RBP18.32■□□□□ 0.52
LMNA-208ENST00000448611 ATN1P54259 1190 aaPredicted RBP18.32■□□□□ 0.52
LMNA-208ENST00000448611 FAM72AQ5TYM5 149 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 FAM72DQ6L9T8 149 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 LRRC31Q6UY01 552 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 BZW1Q7L1Q6 419 aaKnown RBP18.32■□□□□ 0.52
LMNA-208ENST00000448611 TAC4Q86UU9 113 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 FAM72BQ86X60 149 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 DQX1Q8TE96 717 aaKnown RBP18.32■□□□□ 0.52
LMNA-208ENST00000448611 FUBP3Q96I24 572 aaKnown RBP eCLIP18.32■□□□□ 0.52
LMNA-208ENST00000448611 WDR83Q9BRX9 315 aaKnown RBP18.32■□□□□ 0.52
LMNA-208ENST00000448611 GPR62Q9BZJ7 368 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 STMN4Q9H169 189 aaPredicted RBP18.32■□□□□ 0.52
LMNA-208ENST00000448611 HIPK3Q9H422 1215 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 MARCH5Q9NX47 278 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 ZMYND8Q9ULU4 1186 aaPredicted RBP18.32■□□□□ 0.52
LMNA-208ENST00000448611 TET1Q8NFU7 2136 aa18.32■□□□□ 0.52
LMNA-208ENST00000448611 DCLK1O15075 740 aa18.31■□□□□ 0.52
LMNA-208ENST00000448611 GCATO75600 419 aa18.31■□□□□ 0.52
LMNA-208ENST00000448611 IGLV3-25P01717 112 aa18.31■□□□□ 0.52
LMNA-208ENST00000448611 SLC11A1P49279 550 aa18.31■□□□□ 0.52
LMNA-208ENST00000448611 EIF4EBP2Q13542 120 aaPredicted RBP18.31■□□□□ 0.52
LMNA-208ENST00000448611 PAFAH1B3Q15102 231 aaKnown RBP18.31■□□□□ 0.52
LMNA-208ENST00000448611 NFE2Q16621 373 aaPredicted RBP18.31■□□□□ 0.52
LMNA-208ENST00000448611 COL13A1Q5TAT6 717 aaPredicted RBP18.31■□□□□ 0.52
LMNA-208ENST00000448611 SLC39A5Q6ZMH5 540 aa18.31■□□□□ 0.52
LMNA-208ENST00000448611 LEKR1Q6ZMV7 388 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms