RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 L3MBTL1Q9Y468 752 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 TTLL3Q9Y4R7 772 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 CDY2AQ9Y6F7 541 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 MT-ND3P03897 115 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 INHBAP08476 426 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 BGNP21810 368 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 STIP1P31948 543 aaKnown RBP15.32■□□□□ 0.04
SF1-211ENST00000448404 PHBP35232 272 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 CES4AQ5XG92 561 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 UNC5AQ6ZN44 842 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 CLEC20AQ6ZU45 233 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 SLC26A9Q7LBE3 791 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 TDRPQ86YL5 185 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 HACE1Q8IYU2 909 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 ATXN7L3BQ96GX2 97 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 APOL2Q9BQE5 337 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 ULBP1Q9BZM6 244 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 DDX43Q9NXZ2 648 aaKnown RBP15.32■□□□□ 0.04
SF1-211ENST00000448404 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.32■□□□□ 0.04
SF1-211ENST00000448404 MCM8Q9UJA3 840 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 KIAA1257Q9ULG3 409 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 INPP5FQ9Y2H2 1132 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 STAU1O95793 577 aaKnown RBP15.32■□□□□ 0.04
SF1-211ENST00000448404 C1QAP02745 245 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 PTPN1P18031 435 aaKnown RBP15.32■□□□□ 0.04
SF1-211ENST00000448404 TKTL1P51854 596 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 PURAQ00577 322 aaKnown RBP15.32■□□□□ 0.04
SF1-211ENST00000448404 ACAP1Q15027 740 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 SEPT7Q16181 437 aaKnown RBP15.32■□□□□ 0.04
SF1-211ENST00000448404 GDF6Q6KF10 455 aaPredicted RBP15.32■□□□□ 0.04
SF1-211ENST00000448404 KIRREL3Q8IZU9 778 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 SLC7A14Q8TBB6 771 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 MIEF2Q96C03 454 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 SGSM3Q96HU1 749 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 TMEM209Q96SK2 561 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 C11orf84Q9BUA3 381 aaPredicted RBP15.32■□□□□ 0.04
SF1-211ENST00000448404 AP5M1Q9H0R1 490 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 ACTR5Q9H9F9 607 aaPredicted RBP15.32■□□□□ 0.04
SF1-211ENST00000448404 KLHL14Q9P2G3 628 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 HAO1Q9UJM8 370 aa15.32■□□□□ 0.04
SF1-211ENST00000448404 A0A0G2JND7 137 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 WDR27A2RRH5 827 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 LPXNO60711 386 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 FYNP06241 537 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 NEFHP12036 1026 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 BRCC3P46736 316 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 NBPF20Q3BBV1 942 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 CRYBG2Q8N1P7 616 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 ZNF276Q8N554 614 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 BANPQ8N9N5 519 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 SENP8Q96LD8 212 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 CYTH2Q99418 400 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 ARHGEF4Q9NR80 690 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 MARCOQ9UEW3 520 aaPredicted RBP15.31■□□□□ 0.04
SF1-211ENST00000448404 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 DPYSL4O14531 572 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 TNPO2O14787 897 aaKnown RBP15.31■□□□□ 0.04
SF1-211ENST00000448404 PDK2Q15119 407 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 PDK4Q16654 411 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 KYAT1Q16773 422 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 ARHGAP17Q68EM7 881 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 ZCCHC23Q6ZST2 131 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 GTF3C2Q8WUA4 911 aaPredicted RBP15.31■□□□□ 0.04
SF1-211ENST00000448404 USP6NLQ92738 828 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 DHRS4Q9BTZ2 278 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 UBP1Q9NZI7 540 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 KANSL3Q9P2N6 904 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 SLC24A2Q9UI40 661 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.31■□□□□ 0.04
SF1-211ENST00000448404 ZSWIM8A7E2V4 1837 aa15.31■□□□□ 0.04
SF1-211ENST00000448404 PRPF4O43172 522 aaKnown RBP eCLIP15.3■□□□□ 0.042e-6■■■□□ 15.3
SF1-211ENST00000448404 ITGB1P05556 798 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 PAX7P23759 505 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 PGFP49763 221 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 ERFP50548 548 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 DPYSL2Q16555 572 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 NT5DC4Q86YG4 428 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 PARP9Q8IXQ6 854 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 RIBC1Q8N443 379 aaPredicted RBP15.3■□□□□ 0.04
SF1-211ENST00000448404 KLHL29Q96CT2 875 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 PCED1BQ96HM7 432 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 TSPYL2Q9H2G4 693 aaPredicted RBP15.3■□□□□ 0.04
SF1-211ENST00000448404 LRRC4Q9HBW1 653 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 ACSS2Q9NR19 701 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 FBXO6Q9NRD1 293 aaPredicted RBP15.3■□□□□ 0.04
SF1-211ENST00000448404 PAK5Q9P286 719 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 GABRQQ9UN88 632 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 HMX2A2RU54 273 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 HAS3O00219 553 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 MDM4O15151 490 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 EDF1O60869 148 aaKnown RBP15.3■□□□□ 0.04
SF1-211ENST00000448404 CHRNA1P02708 482 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 KITP10721 976 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 NR1H3Q13133 447 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 HEATR6Q6AI08 1181 aaKnown RBP15.3■□□□□ 0.04
SF1-211ENST00000448404 UNC93AQ86WB7 457 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 ZMIZ2Q8NF64 920 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 SMOQ99835 787 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 ZNF670Q9BS34 389 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 PCMTD2Q9NV79 361 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms