RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 VPS45Q9NRW7 570 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 HIF1ANQ9NWT6 349 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 DNAJB11Q9UBS4 358 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 IPO11Q9UI26 975 aaKnown RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 HDAC9Q9UKV0 1011 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 LUC7L2Q9Y383 392 aaKnown RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 INSL5Q9Y5Q6 135 aa1.28□□□□□ -2.2
SNHG3-203ENST00000447507 HEMK1Q9Y5R4 338 aaPredicted RBP1.28□□□□□ -2.2
SNHG3-203ENST00000447507 A0A1B0GUV1 79 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 TRIM43BA6NCK2 446 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 AQP7P3A6NL99 342 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 A6NNC1 897 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 C16orf96A6NNT2 1141 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 TTC34A8MYJ7 566 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 H3BML4 177 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 PYCARD-AS1I3L0S3 204 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 MARCH6O60337 910 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 SOCS5O75159 536 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 WDR47O94967 919 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 MBPP02686 304 aaPredicted RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 HOXC6P09630 235 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 TMEM225BP0DP42 221 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 CHRNB1P11230 501 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 NCLP19338 710 aaKnown RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 TCEA1P23193 301 aaKnown RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 ACVR2AP27037 513 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 NDUFS1P28331 727 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 SLC7A1P30825 629 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 NTSR1P30989 418 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 IDUAP35475 653 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 SOX2P48431 317 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 VPS41P49754 854 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 CPT1AP50416 773 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 COPAP53621 1224 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 ERVFC1-1P60608 527 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 ROR2Q01974 943 aaKnown RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 GAD2Q05329 585 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 DNASE1L3Q13609 305 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 ZNF267Q14586 743 aaPredicted RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 PGM5Q15124 567 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 KRT71Q3SY84 523 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 ANO6Q4KMQ2 910 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 INO80DQ53TQ3 878 aaPredicted RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 PIK3CD-AS1Q5SR53 167 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 PRAMEF19Q5SWL8 479 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 IFIT1BQ5T764 474 aaKnown RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 RNF187Q5TA31 235 aaPredicted RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 EGFLAMQ63HQ2 1017 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 TTLL5Q6EMB2 1281 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 ISM2Q6H9L7 571 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 MZT2AQ6P582 158 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 LRIG3Q6UXM1 1119 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 CLEC9AQ6UXN8 241 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 ZBTB46Q86UZ6 589 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 MICU3Q86XE3 530 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 DDIASQ8IXT1 998 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 FSTL5Q8N475 847 aaPredicted RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 LMO3Q8TAP4 145 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 CENPIQ92674 756 aaPredicted RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 KAT2BQ92831 832 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 EME1Q96AY2 570 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 TRIM43Q96BQ3 446 aaPredicted RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 CHMP4CQ96CF2 233 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 SUCLG2Q96I99 432 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 NT5C1BQ96P26 610 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 HIST1H2AAQ96QV6 131 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 WDR83Q9BRX9 315 aaKnown RBP1.27□□□□□ -2.21
SNHG3-203ENST00000447507 TTLL2Q9BWV7 592 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 STK31Q9BXU1 1019 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 DCLK3Q9C098 648 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 SLC12A5Q9H2X9 1139 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 FAM83DQ9H4H8 585 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 TASP1Q9H6P5 420 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 AAMDCQ9H7C9 122 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 SAP30LQ9HAJ7 183 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 ABHD10Q9NUJ1 306 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 ASNSD1Q9NWL6 643 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 GABBR1Q9UBS5 961 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 VPS51Q9UID3 782 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 KCNG2Q9UJ96 466 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 SLC27A6Q9Y2P4 619 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 SCN5AQ14524 2016 aa1.27□□□□□ -2.21
SNHG3-203ENST00000447507 COL15A1P39059 1388 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 EMSYQ7Z589 1322 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 WASHC2CQ9Y4E1 1318 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 A0A0B4J293 547 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 DENND3A2RUS2 1198 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 DPPA5A6NC42 116 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 SMTNL1A8MU46 457 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 BTBD18B2RXH4 712 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 FAM227AF5H4B4 570 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 RAB27BO00194 218 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 PRYO14603 147 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 TBX3O15119 743 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 MDM4O15151 490 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 DDNO94850 711 aaPredicted RBP1.26□□□□□ -2.21
SNHG3-203ENST00000447507 UBXN7O94888 489 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 INMTO95050 263 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 IFNA2P01563 188 aa1.26□□□□□ -2.21
SNHG3-203ENST00000447507 UMODP07911 640 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms