RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 LRRTM3Q86VH5 581 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 SPATA2LQ8IUW3 424 aaPredicted RBP19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 FAM126BQ8IXS8 530 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 PYROXD2Q8N2H3 581 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 BCAS4Q8TDM0 211 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 PYROXD1Q8WU10 500 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 OLFM3Q96PB7 478 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 EURLQ9NYK6 297 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 DTLQ9NZJ0 730 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 FBXW11Q9UKB1 542 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 RAD54BQ9Y620 910 aa19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.54■□□□□ 0.72
SEMA3D-202ENST00000444867 ZNF638Q14966 1978 aaKnown RBP19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 EXOC1LA0A1B0GW35 172 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 TCRBV7S3A2A0A539 114 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 C5orf60A6NFR6 353 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 GOLGA8MH3BSY2 632 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 PITPNM1O00562 1244 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 SLC10A2Q12908 348 aaPredicted RBP19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 PAFAH1B3Q15102 231 aaKnown RBP19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 PLEKHG4Q58EX7 1191 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 FNBP1LQ5T0N5 605 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 KCNT2Q6UVM3 1135 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 EXOC3L1Q86VI1 746 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 DCP1BQ8IZD4 617 aaKnown RBP19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 APBB2Q92870 758 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 ARHGEF2Q92974 986 aaKnown RBP19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 TMEM209Q96SK2 561 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 RHOBTB2Q9BYZ6 727 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 MAGEB5Q9BZ81 275 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 VPS37BQ9H9H4 285 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 RAB6BQ9NRW1 208 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 SLC24A2Q9UI40 661 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 ACTL7BQ9Y614 415 aa19.53■□□□□ 0.72
SEMA3D-202ENST00000444867 SYNJ2BP-COX16A0A087WUM0 186 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 EEF2KO00418 725 aaKnown RBP19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 SYN3O14994 580 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 B4GALT3O60512 393 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 HSPA8P11142 646 aaKnown RBP19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 OR1G1P47890 313 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 RABGGTBP53611 331 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 DPYSQ14117 519 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 HEATR6Q6AI08 1181 aaKnown RBP19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 PDZD4Q76G19 769 aaPredicted RBP19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 CCDC13Q8IYE1 715 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 TFB1MQ8WVM0 346 aaKnown RBP19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 SELENOSQ9BQE4 189 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 FERMT1Q9BQL6 677 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 ZCWPW1Q9H0M4 648 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 ETNK2Q9NVF9 386 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 TMEM51Q9NW97 253 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 DDIT4Q9NX09 232 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 COX16Q9P0S2 106 aa19.52■□□□□ 0.72
SEMA3D-202ENST00000444867 TANC1Q9C0D5 1861 aa19.52■□□□□ 0.71
SEMA3D-202ENST00000444867 ENPP3O14638 875 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 ATP2A2P16615 1042 aaKnown RBP19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 CXCR3P49682 368 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 SEMA3BQ13214 749 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 PDK1Q15118 436 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 CCDC38Q502W7 563 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 BSPRYQ5W0U4 402 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 B4GALNT4Q76KP1 1039 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 TADA2BQ86TJ2 420 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 ABI1Q8IZP0 508 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 MCUQ8NE86 351 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 SEPT8Q92599 483 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 FUBP3Q96I24 572 aaKnown RBP eCLIP19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 COLEC11Q9BWP8 271 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 TRIM17Q9Y577 477 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 PCDHB7Q9Y5E2 793 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 MYO16Q9Y6X6 1858 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 F8W810 466 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 NBNO60934 754 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 SPAG6O75602 509 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 STK10O94804 968 aaKnown RBP19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 CHN1P15882 459 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 LBX1P52954 281 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 NRLP54845 237 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 HNRNPH2P55795 449 aaKnown RBP19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 GAD2Q05329 585 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 NFE2Q16621 373 aaPredicted RBP19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 MSS51Q4VC12 460 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 RFX8Q6ZV50 586 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 ANKMY2Q8IV38 441 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 VPS52Q8N1B4 723 aa19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 XPO6Q96QU8 1125 aaKnown RBP19.51■□□□□ 0.71
SEMA3D-202ENST00000444867 CLUHO75153 1309 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 GMNCA6NCL1 334 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 PPP1R12AO14974 1030 aaPredicted RBP19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 DCLK1O15075 740 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 HOXA2O43364 376 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 CREB3O43889 395 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 MFSD11O43934 449 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 TADA2AO75478 443 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 TPSB2P20231 275 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 CYP2C18P33260 490 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 GLUD2P49448 558 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 GPX6P59796 221 aa19.5■□□□□ 0.71
SEMA3D-202ENST00000444867 PRKD1Q15139 912 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms