RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 DEC1Q9P2X7 70 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 SFMBT1Q9UHJ3 866 aa12.77□□□□□ -0.37
LTBR-204ENST00000444814 UNC80Q8N2C7 3258 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 LRRC53A6NM62 1247 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 CYP1A1P04798 512 aaPredicted RBP12.76□□□□□ -0.37
LTBR-204ENST00000444814 COL9A1P20849 921 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 CCR1P32246 355 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 GRIA2P42262 883 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 PGFP49763 221 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 ZXDBP98169 803 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 HSF5Q4G112 596 aaPredicted RBP12.76□□□□□ -0.37
LTBR-204ENST00000444814 PTPN20Q4JDL3 420 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 TMEM196Q5HYL7 178 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 SPECC1LQ69YQ0 1117 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 OLFML1Q6UWY5 402 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 Q6ZNB5 142 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 FAM183BPQ6ZVS7 135 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 ARCQ7LC44 396 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 TRMT11Q7Z4G4 463 aaKnown RBP12.76□□□□□ -0.37
LTBR-204ENST00000444814 DENND1CQ8IV53 801 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 WDTC1Q8N5D0 677 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 TMEM105Q8N8V8 129 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 DQX1Q8TE96 717 aaKnown RBP12.76□□□□□ -0.37
LTBR-204ENST00000444814 CLEC4CQ8WTT0 213 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 NDRG1Q92597 394 aaKnown RBP12.76□□□□□ -0.37
LTBR-204ENST00000444814 CHRDQ9H2X0 955 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.76□□□□□ -0.37
LTBR-204ENST00000444814 ADAM22Q9P0K1 906 aa12.76□□□□□ -0.37
LTBR-204ENST00000444814 XIRP2A4UGR9 3374 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 ANAPC1Q9H1A4 1944 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 ZBTB24O43167 697 aaPredicted RBP12.75□□□□□ -0.37
LTBR-204ENST00000444814 TRUB2O95900 331 aaKnown RBP12.75□□□□□ -0.37
LTBR-204ENST00000444814 ERBB2P04626 1255 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 DCNP07585 359 aaKnown RBP12.75□□□□□ -0.37
LTBR-204ENST00000444814 CD72P21854 359 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 MMP8P22894 467 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 MATKP42679 507 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 SOX9P48436 509 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 NRLP54845 237 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 VCPP55072 806 aaKnown RBP12.75□□□□□ -0.37
LTBR-204ENST00000444814 FMO1Q01740 532 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 CENPCQ03188 943 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 CLEC16AQ2KHT3 1053 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 TDRD12Q587J7 1177 aaKnown RBP12.75□□□□□ -0.37
LTBR-204ENST00000444814 GRAMD4Q6IC98 578 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 RHBDF2Q6PJF5 856 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 ZC3H14Q6PJT7 736 aaKnown RBP12.75□□□□□ -0.37
LTBR-204ENST00000444814 MAMSTRQ6ZN01 415 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 C1orf210Q8IVY1 113 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 SPEM1Q8N4L4 309 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 RIN3Q8TB24 985 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 DDI1Q8WTU0 396 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 CPA5Q8WXQ8 436 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 VCPIP1Q96JH7 1222 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 SLC2A13Q96QE2 648 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 SELENOOQ9BVL4 669 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 XPO4Q9C0E2 1151 aaKnown RBP12.75□□□□□ -0.37
LTBR-204ENST00000444814 ARHGEF4Q9NR80 690 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 DDIT4Q9NX09 232 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 TJP2Q9UDY2 1190 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 CYTH4Q9UIA0 394 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 FBXO4Q9UKT5 387 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 AGO1Q9UL18 857 aaKnown RBP12.75□□□□□ -0.37
LTBR-204ENST00000444814 CAPN11Q9UMQ6 739 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 NAALADL1Q9UQQ1 740 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 TECTAO75443 2155 aa12.75□□□□□ -0.37
LTBR-204ENST00000444814 HELZP42694 1942 aaKnown RBP12.75□□□□□ -0.37
LTBR-204ENST00000444814 NEDD8-MDP1E9PL57 170 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 CHRNB1P11230 501 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 PRKCIP41743 596 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 GALK1P51570 392 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 TPGS1Q6ZTW0 290 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 PHF13Q86YI8 300 aaPredicted RBP12.74□□□□□ -0.37
LTBR-204ENST00000444814 DEFB106AQ8N104 65 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 SLC20A1Q8WUM9 679 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 UCMAQ8WVF2 138 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 BAP1Q92560 729 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 BTN2A3PQ96KV6 586 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 PPP1R9BQ96SB3 815 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 FAM126AQ9BYI3 521 aaPredicted RBP12.74□□□□□ -0.37
LTBR-204ENST00000444814 TRIM5Q9C035 493 aa12.74□□□□□ -0.37
LTBR-204ENST00000444814 TBC1D3BA6NDS4 549 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 GOLGA8SH3BPF8 625 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 CACNG3O60359 315 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 ACSL4O60488 711 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 IGLV3-27P01718 113 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 SERPING1P05155 500 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 UNGP13051 313 aaPredicted RBP12.73□□□□□ -0.37
LTBR-204ENST00000444814 TYRP14679 529 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 TNFRSF4P43489 277 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 CXCL12P48061 93 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 GSCP56915 257 aaPredicted RBP12.73□□□□□ -0.37
LTBR-204ENST00000444814 RNASE9P60153 205 aaKnown RBP12.73□□□□□ -0.37
LTBR-204ENST00000444814 MRPS21P82921 87 aaKnown RBP12.73□□□□□ -0.37
LTBR-204ENST00000444814 ARL13BQ3SXY8 428 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 BRMS1LQ5PSV4 323 aa12.73□□□□□ -0.37
LTBR-204ENST00000444814 MPP7Q5T2T1 576 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms