RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 BBS7Q8IWZ6 715 aa14.68□□□□□ -0.06
SSBP3-208ENST00000444533 ATP6V0D2Q8N8Y2 350 aa14.68□□□□□ -0.06
SSBP3-208ENST00000444533 ADAM32Q8TC27 787 aa14.68□□□□□ -0.06
SSBP3-208ENST00000444533 ZNF653Q96CK0 615 aa14.68□□□□□ -0.06
SSBP3-208ENST00000444533 NELL2Q99435 816 aa14.68□□□□□ -0.06
SSBP3-208ENST00000444533 SYT11Q9BT88 431 aa14.68□□□□□ -0.06
SSBP3-208ENST00000444533 ECT2Q9H8V3 914 aa14.68□□□□□ -0.06
SSBP3-208ENST00000444533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.68□□□□□ -0.06
SSBP3-208ENST00000444533 GTSE1Q9NYZ3 720 aa14.68□□□□□ -0.06
SSBP3-208ENST00000444533 COX16Q9P0S2 106 aa14.68□□□□□ -0.06
SSBP3-208ENST00000444533 HELZP42694 1942 aaKnown RBP14.68□□□□□ -0.06
SSBP3-208ENST00000444533 VCANP13611 3396 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 SIGLEC16A6NMB1 481 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 SCAMP3O14828 347 aaKnown RBP14.67□□□□□ -0.06
SSBP3-208ENST00000444533 IRAK2O43187 625 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 FYNP06241 537 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 ADH5P11766 374 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 ARSAP15289 507 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 GAD2Q05329 585 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 DEUP1Q05D60 604 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 TNK2Q07912 1038 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 SLC18A3Q16572 532 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 ANO4Q32M45 955 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 PHLDB2Q86SQ0 1253 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 CCDC117Q8IWD4 279 aaPredicted RBP14.67□□□□□ -0.06
SSBP3-208ENST00000444533 SUGP1Q8IWZ8 645 aaKnown RBP14.67□□□□□ -0.06
SSBP3-208ENST00000444533 ADGRG2Q8IZP9 1017 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 FLCNQ8NFG4 579 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 TTC8Q8TAM2 541 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 FAM3CQ92520 227 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 PBXIP1Q96AQ6 731 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 PIWIL1Q96J94 861 aaKnown RBP14.67□□□□□ -0.06
SSBP3-208ENST00000444533 XPO6Q96QU8 1125 aaKnown RBP14.67□□□□□ -0.06
SSBP3-208ENST00000444533 PANX2Q96RD6 677 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 LINC00597Q9H2U6 94 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 NHEJ1Q9H9Q4 299 aaPredicted RBP14.67□□□□□ -0.06
SSBP3-208ENST00000444533 SPHK2Q9NRA0 654 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 ARHGAP20Q9P2F6 1191 aa14.67□□□□□ -0.06
SSBP3-208ENST00000444533 CNOT8Q9UFF9 292 aaKnown RBP14.67□□□□□ -0.06
SSBP3-208ENST00000444533 TTC28Q96AY4 2481 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 SPECC1L-ADORA2AF8WAN1 911 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 ARNTLO00327 626 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 NRDCO43847 1150 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 MOCS2O96007 188 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 PLEKP08567 350 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 RRM1P23921 792 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 CYLC1P35663 651 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 GRSF1Q12849 480 aaKnown RBP eCLIP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 DHCR24Q15392 516 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 ARL13BQ3SXY8 428 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 BRMS1LQ5PSV4 323 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 ADGRF1Q5T601 910 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 ACBD5Q5T8D3 534 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 SPC24Q8NBT2 197 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 CCDC26Q8TAB7 109 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 CTNNBL1Q8WYA6 563 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 KHSRPQ92945 711 aaKnown RBP eCLIP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 AZIN2Q96A70 460 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 ASIC4Q96FT7 647 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 BTN2A3PQ96KV6 586 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 MCEEQ96PE7 176 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 DDX23Q9BUQ8 820 aaKnown RBP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 BBS2Q9BXC9 721 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 ISCUQ9H1K1 167 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 EPHX3Q9H6B9 360 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 WDCPQ9H6R7 721 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 GRPEL1Q9HAV7 217 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 TAS2R14Q9NYV8 317 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 MYO1AQ9UBC5 1043 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 TMEM59LQ9UK28 342 aa14.66□□□□□ -0.06
SSBP3-208ENST00000444533 AGO1Q9UL18 857 aaKnown RBP14.66□□□□□ -0.06
SSBP3-208ENST00000444533 A0A087X0T9 212 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 KANSL1LA0AUZ9 987 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 FAM228BP0C875 321 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 GPD1P21695 349 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 CTHP32929 405 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 RDXP35241 583 aaKnown RBP14.65□□□□□ -0.06
SSBP3-208ENST00000444533 GSDMDP57764 484 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 STARD6P59095 220 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 PTP4A2Q12974 167 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 PPP2R5DQ14738 602 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 UBXN2BQ14CS0 331 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 SPA17Q15506 151 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 ZC3H12AQ5D1E8 599 aaKnown RBP14.65□□□□□ -0.06
SSBP3-208ENST00000444533 TMEM31Q5JXX7 168 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 LY6G5CQ5SRR4 150 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 C10orf76Q5T2E6 689 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 WDR59Q6PJI9 974 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 Q6ZNB5 142 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 TPGS1Q6ZTW0 290 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 CCDC170Q8IYT3 715 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 CPXM2Q8N436 756 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 ZNF557Q8N988 423 aaPredicted RBP14.65□□□□□ -0.06
SSBP3-208ENST00000444533 TC2NQ8N9U0 490 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 RIN3Q8TB24 985 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 DDI1Q8WTU0 396 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 RXFP2Q8WXD0 754 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 PGAP3Q96FM1 320 aaPredicted RBP14.65□□□□□ -0.06
SSBP3-208ENST00000444533 CFAP57Q96MR6 1250 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms