RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 VCPIP1Q96JH7 1222 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 FOXQ1Q9C009 403 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 SPHK2Q9NRA0 654 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 METTL5Q9NRN9 209 aaKnown RBP12.84□□□□□ -0.35
USP1-203ENST00000442679 ABHD10Q9NUJ1 306 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 DDIT4Q9NX09 232 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 RRN3Q9NYV6 651 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 COX16Q9P0S2 106 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 ADAMTS1Q9UHI8 967 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 TMEM59LQ9UK28 342 aa12.84□□□□□ -0.35
USP1-203ENST00000442679 MRPS17Q9Y2R5 130 aaKnown RBP12.84□□□□□ -0.35
USP1-203ENST00000442679 RTN2O75298 545 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 IGLV3-25P01717 112 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 ADH5P11766 374 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 KRT3P12035 628 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 CHKAP35790 457 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 FLT3P36888 993 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 EIF4A3P38919 411 aaKnown RBP12.83□□□□□ -0.36
USP1-203ENST00000442679 CLCN5P51795 746 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 GAD2Q05329 585 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 NME3Q13232 169 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 ARID5BQ14865 1188 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 ANO4Q32M45 955 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 ZC3H12AQ5D1E8 599 aaKnown RBP12.83□□□□□ -0.36
USP1-203ENST00000442679 NUGGCQ68CJ6 796 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
USP1-203ENST00000442679 WDR59Q6PJI9 974 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 TXNDC11Q6PKC3 985 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 TPGS1Q6ZTW0 290 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 ARCQ7LC44 396 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 DNAAF5Q86Y56 855 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 CNGA4Q8IV77 575 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 SUGP1Q8IWZ8 645 aaKnown RBP12.83□□□□□ -0.36
USP1-203ENST00000442679 RNF34Q969K3 372 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 SLC39A13Q96H72 371 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 FCRL2Q96LA5 508 aaPredicted RBP12.83□□□□□ -0.36
USP1-203ENST00000442679 NELL2Q99435 816 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 LRFN3Q9BTN0 628 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 SELENOOQ9BVL4 669 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 LTB4R2Q9NPC1 389 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 ARHGAP20Q9P2F6 1191 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 NDRG2Q9UN36 371 aaKnown RBP12.83□□□□□ -0.36
USP1-203ENST00000442679 SIT1Q9Y3P8 196 aa12.83□□□□□ -0.36
USP1-203ENST00000442679 MTF2Q9Y483 593 aaPredicted RBP12.83□□□□□ -0.36
USP1-203ENST00000442679 HELZP42694 1942 aaKnown RBP12.82□□□□□ -0.36
USP1-203ENST00000442679 SIGLEC16A6NMB1 481 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 M0QYT0 321 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 IRAK2O43187 625 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 PI15O43692 258 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 GJB6O95452 261 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 LATS1O95835 1130 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 AOC1P19801 751 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 RRM1P23921 792 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 TARSP26639 723 aaKnown RBP12.82□□□□□ -0.36
USP1-203ENST00000442679 SLC11A2P49281 568 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 SULT1E1P49888 294 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 GALK1P51570 392 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 VCPP55072 806 aaKnown RBP12.82□□□□□ -0.36
USP1-203ENST00000442679 GSCP56915 257 aaPredicted RBP12.82□□□□□ -0.36
USP1-203ENST00000442679 EIF4EBP2Q13542 120 aaPredicted RBP12.82□□□□□ -0.36
USP1-203ENST00000442679 PON2Q15165 354 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 SLC25A52Q3SY17 297 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 ADGRF1Q5T601 910 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 CWF19L1Q69YN2 538 aaKnown RBP12.82□□□□□ -0.36
USP1-203ENST00000442679 DNAJC24Q6P3W2 148 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 EMC1Q8N766 993 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 C3orf20Q8ND61 904 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 PJA1Q8NG27 643 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 JOSD2Q8TAC2 188 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 RXFP2Q8WXD0 754 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 NT5C3BQ969T7 300 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 EXOC4Q96A65 974 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 AZIN2Q96A70 460 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 CHFRQ96EP1 664 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 NPY6RQ99463 290 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 P2RY13Q9BPV8 354 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 OSBPL6Q9BZF3 934 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 ISCUQ9H1K1 167 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.82□□□□□ -0.36
USP1-203ENST00000442679 SLC12A6Q9UHW9 1150 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 STOML2Q9UJZ1 356 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 STAP1Q9ULZ2 295 aa12.82□□□□□ -0.36
USP1-203ENST00000442679 COL4A3Q01955 1670 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 A0A087X0T9 212 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 GOLGA6L7A0A1B0GV03 622 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 NEDD8-MDP1E9PL57 170 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 TRDMT1O14717 391 aaKnown RBP12.81□□□□□ -0.36
USP1-203ENST00000442679 NCAM2O15394 837 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 HOXC11O43248 304 aaPredicted RBP12.81□□□□□ -0.36
USP1-203ENST00000442679 ACSL4O60488 711 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 TSPAN3O60637 253 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 ADCY5O95622 1261 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 MOCS2O96007 188 aaPredicted RBP12.81□□□□□ -0.36
USP1-203ENST00000442679 F9P00740 461 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 APOEP02649 317 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 FAM228BP0C875 321 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 SLC2A3P11169 496 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 PDGFRAP16234 1089 aa12.81□□□□□ -0.36
USP1-203ENST00000442679 TFE3P19532 575 aaPredicted RBP12.81□□□□□ -0.36
USP1-203ENST00000442679 CCR1P32246 355 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms