RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 GRIA3P42263 894 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 NSUN2Q08J23 767 aaKnown RBP eCLIP10.59□□□□□ -0.71
LIN54-202ENST00000442461 PRKG1Q13976 671 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 SLC1A5Q15758 541 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 FAXCQ5TGI0 409 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 SLC9A4Q6AI14 798 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 HAUS6Q7Z4H7 955 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 SKA2Q8WVK7 121 aaPredicted RBP10.59□□□□□ -0.71
LIN54-202ENST00000442461 TUBGCP4Q9UGJ1 667 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 NPHP4O75161 1426 aaPredicted RBP10.59□□□□□ -0.71
LIN54-202ENST00000442461 LOC100506127A0A0U1RQW1 187 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 KBTBD13C9JR72 458 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 NR5A2O00482 541 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 SGPL1O95470 568 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 HADHAP40939 763 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 GRM1Q13255 1194 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 FASTKQ14296 549 aaKnown RBP10.59□□□□□ -0.71
LIN54-202ENST00000442461 PDK1Q15118 436 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 MOGQ16653 247 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 FAM83EQ2M2I3 478 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 RP9Q8TA86 221 aaKnown RBP10.59□□□□□ -0.71
LIN54-202ENST00000442461 ACTL9Q8TC94 416 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 HM13Q8TCT9 377 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 RAB2BQ8WUD1 216 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 VPS33AQ96AX1 596 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 POP1Q99575 1024 aaKnown RBP10.59□□□□□ -0.71
LIN54-202ENST00000442461 MED10Q9BTT4 135 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 FSD1LQ9BXM9 530 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 SP140LQ9H930 580 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 SLC7A8Q9UHI5 535 aa10.59□□□□□ -0.71
LIN54-202ENST00000442461 FAM32AQ9Y421 112 aaKnown RBP10.59□□□□□ -0.71
LIN54-202ENST00000442461 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 ZSCAN5BA6NJL1 495 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 J3QRK9 145 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 ZBTB5O15062 677 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 TIMM44O43615 452 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 CYP2D6P10635 497 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 RRM1P23921 792 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 PRELPP51888 382 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 PSME3P61289 254 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 PGS1Q32NB8 556 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 RUNDC3AQ59EK9 446 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 METTL21CQ5VZV1 264 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 AADACL2Q6P093 401 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 HACE1Q8IYU2 909 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 OR6P1Q8NGX9 317 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 FBXL8Q96CD0 374 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 PTCD3Q96EY7 689 aaKnown RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 TSPAN17Q96FV3 270 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 KCTD14Q9BQ13 255 aaPredicted RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 EIF2AK1Q9BQI3 630 aaKnown RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 ACAT2Q9BWD1 397 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 SEPT9Q9UHD8 586 aaPredicted RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 BAIAP2Q9UQB8 552 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 KRT87PA6NCN2 255 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 OR6B1O95007 311 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 CRTAMO95727 393 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 CCNE2O96020 404 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 GSTT2P0CG29 244 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 GSTT2BP0CG30 244 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 TALDO1P37837 337 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 SLC9A3P48764 834 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 CCNG1P51959 295 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 RELAQ04206 551 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 DLG1Q12959 904 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 ZBED5Q49AG3 693 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 EPC2Q52LR7 807 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 EFL1Q7Z2Z2 1120 aaKnown RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 CYP2U1Q7Z449 544 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 SLC20A1Q8WUM9 679 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 CCDC126Q96EE4 140 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 VPS4AQ9UN37 437 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 GINS2Q9Y248 185 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 DGKBQ9Y6T7 804 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 A0A1W2PPM1 405 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 DENND3A2RUS2 1198 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 FANCGO15287 622 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 RARBP10826 455 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 CREB1P16220 341 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 HK2P52789 917 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 BNIP3Q12983 259 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 SMTNL2Q2TAL5 461 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 MFSD14BQ5SR56 506 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 ELMOD2Q8IZ81 293 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 BBS5Q8N3I7 341 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 AGAP3Q96P47 875 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 CIB1Q99828 191 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 COMMD8Q9NX08 183 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 ANAPC2Q9UJX6 822 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 ADAM30Q9UKF2 790 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 TCHHQ07283 1943 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 MLH3Q9UHC1 1453 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 RBAK-RBAKDNI3L0D1 243 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 KATNA1O75449 491 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 AKAP3O75969 853 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 FARP2O94887 1054 aaPredicted RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 SLC26A3P40879 764 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms