RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 KIAA1958Q8N8K9 716 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RHPN1Q8TCX5 695 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 NRG4Q8WWG1 115 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RASSF5Q8WWW0 418 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 KRT35Q92764 455 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 GIMAP5Q96F15 307 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 LRGUKQ96M69 825 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RUNDC3BQ96NL0 473 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SERPINB12Q96P63 405 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 YME1L1Q96TA2 773 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PHF20Q9BVI0 1012 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CHID1Q9BWS9 393 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 EMILIN2Q9BXX0 1053 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 B3GNT4Q9C0J1 378 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TP63Q9H3D4 680 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 EPB41L1Q9H4G0 881 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UGT1A7Q9HAW7 530 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UGT1A10Q9HAW8 530 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UGT1A8Q9HAW9 530 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 C12orf10Q9HB07 376 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 POLMQ9NP87 494 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 RPRD1BQ9NQG5 326 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 PARVAQ9NVD7 372 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SNTG2Q9NY99 539 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ABI2Q9NYB9 513 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 AMACRQ9UHK6 382 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PACSIN2Q9UNF0 486 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.86□□□□□ -1.95
LIG4-203ENST00000442234 STON1Q9Y6Q2 735 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 DOPEY1Q5JWR5 2465 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 COL14A1Q05707 1796 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 ADAMTS7Q9UKP4 1686 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PITPNM2Q9BZ72 1349 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 MAGEB16A2A368 324 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 KRBA1A5PL33 1030 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 B2RBV5 119 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 H3BRJ5 948 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 M0QX08 132 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 DDX39AO00148 427 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 GRM8O00222 908 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 E2F3O00716 465 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 FKBP6O75344 327 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 KLHL2O95198 593 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 HMGCRP04035 888 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CYP2D6P10635 497 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CTRB1P17538 263 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 KRT15P19012 456 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SLC5A2P31639 672 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 GPD2P43304 727 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 HNRNPFP52597 415 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 ARPP19P56211 112 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 GSTO1P78417 241 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ECT2LQ008S8 904 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RUNX1T1Q06455 604 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CACNB2Q08289 660 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 TFCP2Q12800 502 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SLC29A2Q14542 456 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 SLC39A14Q15043 492 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UAP1Q16222 522 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 TRIM71Q2Q1W2 868 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 TRMT5Q32P41 509 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 PLA2G4EQ3MJ16 856 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 UBE2UQ5VVX9 321 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 HEATR6Q6AI08 1181 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 CTRB2Q6GPI1 263 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 RWDD4Q6NW29 188 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 PPP1R18Q6NYC8 613 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CYP20A1Q6UW02 462 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ATG14Q6ZNE5 492 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 EPM2AIP1Q7L775 607 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 TMC3Q7Z5M5 1100 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 NET1Q7Z628 596 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 ADAT2Q7Z6V5 191 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 PLEKHH3Q7Z736 793 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 MTDHQ86UE4 582 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 KBTBD2Q8IY47 623 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ARL6IP6Q8N6S5 226 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CCNYL1Q8N7R7 359 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 EPS8L3Q8TE67 593 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 TRIB2Q92519 343 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ESR2Q92731 530 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 ATG4CQ96DT6 458 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PGM2Q96G03 612 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 NSL1Q96IY1 281 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 METTL2AQ96IZ6 378 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 FAM20AQ96MK3 541 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 PRICKLE1Q96MT3 831 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 PURBQ96QR8 312 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 LPIN3Q9BQK8 851 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 CNPY3Q9BT09 278 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 METTL22Q9BUU2 404 aaPredicted RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 NOC4LQ9BVI4 516 aaKnown RBP2.86□□□□□ -1.95
LIG4-203ENST00000442234 C1QTNF2Q9BXJ5 285 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 IFT22Q9H7X7 185 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 DNAJC18Q9H819 358 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 NPHS2Q9NP85 383 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 TCF7L2Q9NQB0 619 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.86□□□□□ -1.95
LIG4-203ENST00000442234 STK17AQ9UEE5 414 aa2.86□□□□□ -1.95
LIG4-203ENST00000442234 EVLQ9UI08 416 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms