RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MGRN1O60291 552 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 HEXIM1O94992 359 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 FYNP06241 537 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 PEX19P40855 299 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 GLUD2P49448 558 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 EPHB4P54760 987 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 CDH6P55285 790 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 VSNL1P62760 191 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 USP4Q13107 963 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 MGAT5BQ3V5L5 792 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SYPL2Q5VXT5 272 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 BSPRYQ5W0U4 402 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 RNF19BQ6ZMZ0 732 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 CYP4V2Q6ZWL3 525 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 NUP93Q8N1F7 819 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 GALNT15Q8N3T1 639 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 FIBCD1Q8N539 461 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 GORASP1Q9BQQ3 440 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 CALN1Q9BXU9 219 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 INSL6Q9Y581 213 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 PCDHB12Q9Y5F1 795 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 MDM4O15151 490 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 ZMYND10O75800 440 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 ENDOD1O94919 500 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 URODP06132 367 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SYN1P17600 705 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 OR1D2P34982 312 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 RPL10AP62906 217 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 HTRA4P83105 476 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 DR1Q01658 176 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 ROR1Q01973 937 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 DSG1Q02413 1049 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 DHX34Q14147 1143 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 KRT81Q14533 505 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 PDK2Q15119 407 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 CCDC137Q6PK04 289 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 BEND5Q7L4P6 421 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 BHLHA9Q7RTU4 235 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 ANKS1BQ7Z6G8 1248 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 APLFQ8IW19 511 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 PARP9Q8IXQ6 854 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 MIPOL1Q8TD10 442 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SEPT5Q99719 369 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SNRNP25Q9BV90 132 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 HERC2P3Q9BVR0 1158 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 ADAM33Q9BZ11 813 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 MTIF3Q9H2K0 278 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 FBXO44Q9H4M3 255 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 LRRC19Q9H756 370 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SLC40A1Q9NP59 571 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 CXXC1Q9P0U4 656 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SLC27A5Q9Y2P5 690 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 MKI67P46013 3256 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 LTBP2Q14767 1821 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 FNDC1Q4ZHG4 1894 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 COL4A6Q14031 1691 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 C3orf70A6NLC5 250 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 RPL17P18621 184 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 COILP38432 576 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 RANBP1P43487 201 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 ATXN1P54253 815 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 PITX1P78337 314 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 GUCY2DQ02846 1103 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 KRT17Q04695 432 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 DUSP4Q13115 394 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 NME3Q13232 169 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 TAZQ16635 292 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 DBN1Q16643 649 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 ERMARDQ5T6L9 678 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SDHAF4Q5VUM1 108 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 DDX53Q86TM3 631 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 FAM131BQ86XD5 332 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 IFT20Q8IY31 132 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 CCDC105Q8IYK2 499 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 TTC9BQ8N6N2 239 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SLC7A14Q8TBB6 771 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 C1orf54Q8WWF1 131 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 EDEM1Q92611 657 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 HINFPQ9BQA5 517 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 LBHD1Q9BQE6 289 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 UTP6Q9NYH9 597 aaKnown RBP8.39□□□□□ -1.07
CCDC39-201ENST00000442201 STK39Q9UEW8 545 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 PCYOX1Q9UHG3 505 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SLC4A7Q9Y6M7 1214 aa8.39□□□□□ -1.07
CCDC39-201ENST00000442201 SYNJ2BP-COX16A0A087WUM0 186 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 WDR27A2RRH5 827 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 A6NNZ2 444 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 TTI1O43156 1089 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 ADAM12O43184 909 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 F9P00740 461 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 CD48P09326 243 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 HAPLN1P10915 354 aaPredicted RBP8.38□□□□□ -1.07
CCDC39-201ENST00000442201 MAGEA10P43363 369 aaPredicted RBP8.38□□□□□ -1.07
CCDC39-201ENST00000442201 GPR15P49685 360 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 YWHAGP61981 247 aaKnown RBP eCLIP8.38□□□□□ -1.07
CCDC39-201ENST00000442201 IFFO1Q0D2I5 559 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 CCNG2Q16589 344 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 TUBB8Q3ZCM7 444 aa8.38□□□□□ -1.07
CCDC39-201ENST00000442201 MFSD4BQ5TF39 518 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms