RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 WRNIP1Q96S55 665 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 GABBR1Q9UBS5 961 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 CNTN6Q9UQ52 1028 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 EFR3BQ9Y2G0 817 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 DCXO43602 365 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 APRTP07741 180 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 CD1EP15812 388 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 TBXAS1P24557 533 aaPredicted RBP20.94■□□□□ 0.94
SHOX2-203ENST00000441443 TNFAIP1Q13829 316 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 SMAD1Q15797 465 aaKnown RBP20.94■□□□□ 0.94
SHOX2-203ENST00000441443 C6orf52Q5T4I8 152 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 THNSL1Q8IYQ7 743 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 ANKEF1Q9NU02 776 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 BLOC1S6Q9UL45 172 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 ZNF646O15015 1829 aaPredicted RBP20.94■□□□□ 0.94
SHOX2-203ENST00000441443 A0A1B0GTW7 788 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 GSRP00390 522 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 ATP5BP06576 529 aaKnown RBP20.94■□□□□ 0.94
SHOX2-203ENST00000441443 HSPBAP1Q96EW2 488 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 MAN1C1Q9NR34 630 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 PXMP2Q9NR77 195 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 DMTF1Q9Y222 760 aa20.94■□□□□ 0.94
SHOX2-203ENST00000441443 BIRC5O15392 142 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 OSBPP22059 807 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 ATXN3P54252 364 aaPredicted RBP20.93■□□□□ 0.94
SHOX2-203ENST00000441443 MBLAC2Q68D91 279 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 PPP1R2P3Q6NXS1 205 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 UNC5AQ6ZN44 842 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 TSHZ1Q6ZSZ6 1077 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 GALNT4Q8N4A0 578 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 TBC1D22BQ9NU19 505 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 SLC17A6Q9P2U8 582 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 AK5Q9Y6K8 562 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 APOEP02649 317 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 FGF3P11487 239 aaPredicted RBP20.93■□□□□ 0.94
SHOX2-203ENST00000441443 PRKCHP24723 683 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 DCTN2Q13561 401 aaKnown RBP20.93■□□□□ 0.94
SHOX2-203ENST00000441443 HSP90AA5PQ58FG0 334 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 SCARA5Q6ZMJ2 495 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 ARCQ7LC44 396 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 CAND1Q86VP6 1230 aaKnown RBP20.93■□□□□ 0.94
SHOX2-203ENST00000441443 CMTM5Q96DZ9 223 aa20.93■□□□□ 0.94
SHOX2-203ENST00000441443 MRPS26Q9BYN8 205 aaKnown RBP20.93■□□□□ 0.94
SHOX2-203ENST00000441443 FRMD8P1Q9BZ68 369 aaPredicted RBP20.93■□□□□ 0.94
SHOX2-203ENST00000441443 TDRKHQ9Y2W6 561 aaKnown RBP20.93■□□□□ 0.94
SHOX2-203ENST00000441443 WDR64B1ANS9 1081 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 VWA5AO00534 786 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 ZNF132P52740 706 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 MRPS22P82650 360 aaKnown RBP20.92■□□□□ 0.94
SHOX2-203ENST00000441443 ACAP1Q15027 740 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 PTPN20Q4JDL3 420 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 SWSAP1Q6NVH7 229 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 MPP5Q8N3R9 675 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 RAB3IL1Q8TBN0 382 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 LZICQ8WZA0 190 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 PCDHGA4Q9Y5G9 962 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 KCNN4O15554 427 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 GMPRP36959 345 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 MTTPP55157 894 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 HDAC4P56524 1084 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 KRT81Q14533 505 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 SH3D19Q5HYK7 790 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 TRIM67Q6ZTA4 783 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 UNC5BQ8IZJ1 945 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 Q9H521 79 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 NRDE2Q9H7Z3 1164 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 LIN28AQ9H9Z2 209 aaKnown RBP20.92■□□□□ 0.94
SHOX2-203ENST00000441443 PSMD13Q9UNM6 376 aa20.92■□□□□ 0.94
SHOX2-203ENST00000441443 BTBD19C9JJ37 291 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 TRMUO75648 421 aaKnown RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 NR3C2P08235 984 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 ARRB2P32121 409 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 RPL26P61254 145 aaKnown RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 TAP1Q03518 808 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 PPP6R3Q5H9R7 873 aaPredicted RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 N4BP2L1Q5TBK1 243 aaPredicted RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 AMIGO2Q86SJ2 522 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 MTMR14Q8NCE2 650 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 BTBD7Q9P203 1132 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 E2F8A0AVK6 867 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 CHADO15335 359 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 TNFAIP8O95379 198 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 MIPP30301 263 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 DENND1BQ6P3S1 775 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 ZFRQ96KR1 1074 aaKnown RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 LRGUKQ96M69 825 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 COPS7BQ9H9Q2 264 aaPredicted RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 SLC15A5A6NIM6 579 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 PPIDQ08752 370 aaKnown RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 PDK1Q15118 436 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 TAZQ16635 292 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 DLK2Q6UY11 383 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 ZBED3Q96IU2 234 aaPredicted RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 POLR3FQ9H1D9 316 aaPredicted RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 TIMMDC1Q9NPL8 285 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 MKS1Q9NXB0 559 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 SEPT9Q9UHD8 586 aaPredicted RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 EMCNQ9ULC0 261 aa20.91■□□□□ 0.94
SHOX2-203ENST00000441443 GNEQ9Y223 722 aaKnown RBP20.91■□□□□ 0.94
SHOX2-203ENST00000441443 CNTNAP2Q9UHC6 1331 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms