RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 PAK5Q9P286 719 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 SLC24A2Q9UI40 661 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 GIT1Q9Y2X7 761 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 CDY2AQ9Y6F7 541 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 CEP250Q9BV73 2442 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 EXOC1LA0A1B0GW35 172 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 GMNCA6NCL1 334 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 E7ESA3 106 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 PPEF2O14830 753 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 GPR182O15218 404 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 CHADO15335 359 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 PAPSS1O43252 624 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 ZBED1O96006 694 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 IFNB1P01574 187 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 RBP3P10745 1247 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 PECAM1P16284 738 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 NPR3P17342 541 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 RPL9P32969 192 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 GNL1P36915 607 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 CCT5P48643 541 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 LHX1P48742 406 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 NR2C2P49116 596 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 SLC18A1P54219 525 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 DYNLT1P63172 113 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 RNASELQ05823 741 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 XRCC4Q13426 336 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 LLGL1Q15334 1064 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 ATP13A4Q4VNC1 1196 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 ERMARDQ5T6L9 678 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 PMF1Q6P1K2 205 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 PDIK1LQ8N165 341 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 SMG8Q8ND04 991 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 ZNF473Q8WTR7 871 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 KCTD13Q8WZ19 329 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 CENPIQ92674 756 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 MRPL38Q96DV4 380 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 CHMP6Q96FZ7 201 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 SGSM3Q96HU1 749 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 UROC1Q96N76 676 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 RNF157Q96PX1 679 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 XPO6Q96QU8 1125 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 PEBP4Q96S96 227 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 TMEM121Q9BTD3 319 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 C11orf84Q9BUA3 381 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 DDX23Q9BUQ8 820 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 SNRNP25Q9BV90 132 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 ADAM7Q9H2U9 754 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 PCDH18Q9HCL0 1135 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 SAYSD1Q9NPB0 183 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 NGRNQ9NPE2 291 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 FAM105AQ9NUU6 356 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 INTS9Q9NV88 658 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 TMEM51Q9NW97 253 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 RRN3Q9NYV6 651 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 PSMC3IPQ9P2W1 217 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 RRP15Q9Y3B9 282 aaKnown RBP9.49□□□□□ -0.89
HDAC6-209ENST00000440653 HES2Q9Y543 173 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 SQORQ9Y6N5 450 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 GPR179Q6PRD1 2367 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 MYO16Q9Y6X6 1858 aa9.49□□□□□ -0.89
HDAC6-209ENST00000440653 TLDC2A0PJX2 215 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 BCLAF3A2AJT9 711 aaKnown RBP9.48□□□□□ -0.89
HDAC6-209ENST00000440653 SMIM23A6NLE4 172 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 HACD1B0YJ81 288 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 PTGESO14684 152 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 CABYRO75952 493 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 FAM200BP0CF97 657 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 ODC1P11926 461 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 AKAP5P24588 427 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 PCSK1P29120 753 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 MATKP42679 507 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 MAGEA6P43360 314 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 RGS7P49802 495 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 BCAR1P56945 870 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 LILRA4P59901 499 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 DEFB103AP81534 67 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 MGAT3Q09327 533 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 HIC1Q14526 733 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 LONRF1Q17RB8 773 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 CCDC14Q49A88 953 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 KCNT1Q5JUK3 1230 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 GKAP1Q5VSY0 366 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-209ENST00000440653 ARHGEF18Q6ZSZ5 1173 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 TADA2BQ86TJ2 420 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 SIX6OS1Q8N1H7 587 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 C12orf29Q8N999 325 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 NAT8LQ8N9F0 302 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 APBB2Q92870 758 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 ARHGEF2Q92974 986 aaKnown RBP9.48□□□□□ -0.89
HDAC6-209ENST00000440653 ZBTB9Q96C00 473 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 ACSF2Q96CM8 615 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-209ENST00000440653 LRRC39Q96DD0 335 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 QKIQ96PU8 341 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC6-209ENST00000440653 PLCD4Q9BRC7 762 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 ZBED2Q9BTP6 218 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 DUSP16Q9BY84 665 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 KLC2Q9H0B6 622 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 CDHR5Q9HBB8 845 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 SSU72Q9NP77 194 aaKnown RBP9.48□□□□□ -0.89
HDAC6-209ENST00000440653 TRMT13Q9NUP7 481 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms