RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SF3A2Q15428 464 aaKnown RBP20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 ARHGAP44Q17R89 818 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 SCML4Q8N228 414 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 CPXM2Q8N436 756 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 UCMAQ8WVF2 138 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 FAM149B1Q96BN6 582 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 ERLEC1Q96DZ1 483 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 HSFY1Q96LI6 401 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 ZSWIM1Q9BR11 485 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 RTKNQ9BST9 563 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 STARD13Q9Y3M8 1113 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 CEP192Q8TEP8 1941 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 PRRT4C9JH25 899 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 PES1O00541 588 aaKnown RBP20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 SART1O43290 800 aaKnown RBP20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 PENKP01210 267 aaPredicted RBP20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 PRKCSHP14314 528 aaPredicted RBP20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 KCNA4P22459 653 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 ATXN1P54253 815 aaKnown RBP20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 ZNF445P59923 1031 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 ARID5AQ03989 594 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 STARD3Q14849 445 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 TRIP4Q15650 581 aaPredicted RBP20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 EXOC3L4Q17RC7 722 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 FYB2Q5VWT5 728 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 PMS2CLQ68D20 193 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 CYP2U1Q7Z449 544 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 ANKS1BQ7Z6G8 1248 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 RLN3Q8WXF3 142 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 VPS45Q9NRW7 570 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 APEX2Q9UBZ4 518 aa20.72■□□□□ 0.91
SHROOM1-204ENST00000440118 SPTBN2O15020 2390 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 ZNF806P0C7X5 589 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 CHRM1P11229 460 aaPredicted RBP20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 NCAM1P13591 858 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 BCKDHBP21953 392 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 ACADSBP45954 432 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 E2F5Q15329 346 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 DPCR1Q3MIW9 517 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 MPPE1Q53F39 396 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 GJB7Q6PEY0 223 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 LPCAT2Q7L5N7 544 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 CLEC4CQ8WTT0 213 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 ACOX2Q99424 681 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 TRIM62Q9BVG3 475 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 SMOC1Q9H4F8 434 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 THAP9Q9H5L6 903 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 CACNA2D2Q9NY47 1150 aa20.71■□□□□ 0.91
SHROOM1-204ENST00000440118 CAPN9O14815 690 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 TSPAN3O60637 253 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 CAVIN2O95810 425 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 CISD3P0C7P0 127 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 SLC9A1P19634 815 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 SLC11A2P49281 568 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 MAN2A1Q16706 1144 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 HSP90AA4PQ58FG1 418 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 NUGGCQ68CJ6 796 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 IL31Q6EBC2 164 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 MSANTD2Q6P1R3 559 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 DENND1BQ6P3S1 775 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 ARMCX6Q7L4S7 300 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 GBP4Q96PP9 640 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 CIPCQ9C0C6 399 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 CALCOCO1Q9P1Z2 691 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 CNTN6Q9UQ52 1028 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 SLC27A6Q9Y2P4 619 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 RAD54BQ9Y620 910 aa20.7■□□□□ 0.9
SHROOM1-204ENST00000440118 DNAH14Q0VDD8 3507 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 TYW5A2RUC4 315 aaKnown RBP20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 DCDC2BA2VCK2 349 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 GTPBP10A4D1E9 387 aaKnown RBP20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 GDF9O60383 454 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 LATS1O95835 1130 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 P2RY2P41231 377 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 TBX4P57082 545 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 ADGRF1Q5T601 910 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 UNC45BQ8IWX7 931 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 SCUBE3Q8IX30 993 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 OLIG1Q8TAK6 271 aa20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 IPO4Q8TEX9 1081 aaKnown RBP20.69■□□□□ 0.9
SHROOM1-204ENST00000440118 BCLAF3A2AJT9 711 aaKnown RBP20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 SLC30A4O14863 429 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 GABRG2P18507 467 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 ERCC5P28715 1186 aaPredicted RBP20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 GPD2P43304 727 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 EIF4HQ15056 248 aaKnown RBP20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 GEN1Q17RS7 908 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 KIAA1324Q6UXG2 1013 aaKnown RBP20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 FAM217AQ8IXS0 508 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 ZNF606Q8WXB4 792 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 SERPINB11Q96P15 392 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 MED15Q96RN5 788 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 GABRG3Q99928 467 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 SLC2A11Q9BYW1 496 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 STON1Q9Y6Q2 735 aa20.68■□□□□ 0.9
SHROOM1-204ENST00000440118 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 GOLGA6L22H0YM25 854 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 GFRA2O00451 464 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 NPC1O15118 1278 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 SYNCRIPO60506 623 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms