RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 GALK1P51570 392 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 AMPD2Q01433 879 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 GAD2Q05329 585 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 FZD5Q13467 585 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 ANO4Q32M45 955 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 TDRD12Q587J7 1177 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 HGSNATQ68CP4 663 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 C1orf228Q6PIY5 440 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 TPGS1Q6ZTW0 290 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 ZNF687Q8N1G0 1237 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 FCRL2Q96LA5 508 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 OSBPL6Q9BZF3 934 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 FAM204AQ9H8W3 233 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 FBRSL1Q9HCM7 1045 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 SYNJ2BP-COX16A0A087WUM0 186 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 DDX3XO00571 662 aaKnown RBP eCLIP20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 IRAK2O43187 625 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 GJB6O95452 261 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 IGLV3-25P01717 112 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 NOS2P35228 1153 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 OPRD1P41143 372 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 MATKP42679 507 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 SLC6A11P48066 632 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 RING1Q06587 406 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 TRIM14Q14142 442 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 MON1BQ7L1V2 547 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 SLC39A13Q96H72 371 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 P2RY13Q9BPV8 354 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 ANP32EQ9BTT0 268 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 LMAN1LQ9HAT1 526 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 METTL5Q9NRN9 209 aaKnown RBP20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 COX16Q9P0S2 106 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 TMEM59LQ9UK28 342 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 TLR6Q9Y2C9 796 aa20.27■□□□□ 0.84
SEMA3B-206ENST00000439487 TRDMT1O14717 391 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 SERPING1P05155 500 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 CALB1P05937 261 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 PLEKP08567 350 aaPredicted RBP20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 FLT3P36888 993 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 NNTQ13423 1086 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 ZC3H12AQ5D1E8 599 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 NUGGCQ68CJ6 796 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 FSTL4Q6MZW2 842 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 TRNP1Q6NT89 227 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 TMC6Q7Z403 805 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 C12orf40Q86WS4 652 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 DNAAF5Q86Y56 855 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 UNC45BQ8IWX7 931 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 NAT16Q8N8M0 369 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 CD101Q93033 1021 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 RBM12Q9NTZ6 932 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 DDIT4Q9NX09 232 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 DLGAP2Q9P1A6 1054 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 WDR35Q9P2L0 1181 aa20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 BZW2Q9Y6E2 419 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-206ENST00000439487 GOLGA6L7A0A1B0GV03 622 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 NEDD8-MDP1E9PL57 170 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 M0QYT0 321 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 NCAM2O15394 837 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 HOXC11O43248 304 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 MOCS2O96007 188 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 CHRNB1P11230 501 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 TFE3P19532 575 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 GBP1P32455 592 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 CHKAP35790 457 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 SULT1E1P49888 294 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 C1QBPQ07021 282 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 NME3Q13232 169 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 EIF4EBP2Q13542 120 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 TMEM196Q5HYL7 178 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 FAM217AQ8IXS0 508 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 MCOLN2Q8IZK6 566 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 EMC1Q8N766 993 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 BHMTQ93088 406 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 CLDN23Q96B33 292 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 P2RY11Q96G91 374 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 NPY6RQ99463 290 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 BBS2Q9BXC9 721 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 ADAM33Q9BZ11 813 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 PLK2Q9NYY3 685 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 MARK1Q9P0L2 795 aa20.25■□□□□ 0.83
SEMA3B-206ENST00000439487 ACSL4O60488 711 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 TSPAN3O60637 253 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 LATS1O95835 1130 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 EGFP01133 1207 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 TPM1P09493 284 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 TYRP14679 529 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 ZNF75DP51815 510 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 ADKP55263 362 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 GSCP56915 257 aaPredicted RBP20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 GRSF1Q12849 480 aaKnown RBP eCLIP20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 OTUD1Q5VV17 481 aaPredicted RBP20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 CPXM2Q8N436 756 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 OR8K1Q8NGG5 319 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 JOSD2Q8TAC2 188 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 RNF34Q969K3 372 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 SELENOOQ9BVL4 669 aa20.24■□□□□ 0.83
SEMA3B-206ENST00000439487 RRN3Q9NYV6 651 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms