RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 C12orf50Q8NA57 414 aaPredicted RBP8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 SLC4A11Q8NBS3 891 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 ENGASEQ8NFI3 743 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 HEXIM2Q96MH2 286 aaKnown RBP8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 CYP3A43Q9HB55 503 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 CYLDQ9NQC7 956 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 SPHK2Q9NRA0 654 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 TMPRSS4Q9NRS4 437 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 CISHQ9NSE2 258 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 COMMD8Q9NX08 183 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 RAB20Q9NX57 234 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 SCML2Q9UQR0 700 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 KIAA1549LQ6ZVL6 1849 aa8.54□□□□□ -1.04
AC012494.1-201ENST00000439259 RALGAPA1Q6GYQ0 2036 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 A0A0A0MRY4 1105 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 PATE3B3GLJ2 98 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 NEDD8-MDP1E9PL57 170 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 GOLGA6L22H0YM25 854 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 TULP2O00295 520 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 CETN3O15182 167 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 HOXC11O43248 304 aaPredicted RBP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 HMBSP08397 361 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 EPB41P11171 864 aaKnown RBP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 ATP5C1P36542 298 aaKnown RBP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 EIF2DP41214 584 aaKnown RBP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 KIF11P52732 1056 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 RAD23BP54727 409 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 RAB15P59190 212 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 MRPS21P82921 87 aaKnown RBP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 LRMPQ12912 555 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 EDRF1Q3B7T1 1238 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 USP39Q53GS9 565 aaKnown RBP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 C10orf120Q5SQS8 335 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 C10orf76Q5T2E6 689 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 ZNF658Q5TYW1 1059 aaPredicted RBP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 BTBD8Q5XKL5 378 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 TOGARAM2Q6ZUX3 1019 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 HTR3DQ70Z44 454 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 ARMCX6Q7L4S7 300 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 KIAA1958Q8N8K9 716 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 CCDC150Q8NCX0 1101 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 FBXL13Q8NEE6 735 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 HMGB4Q8WW32 186 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 NDRG1Q92597 394 aaKnown RBP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 OTUB2Q96DC9 234 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 TMEM176AQ96HP8 235 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 LOXL4Q96JB6 756 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 CNOT6LQ96LI5 555 aaKnown RBP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 CNTNAP3BQ96NU0 1288 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 ACOX2Q99424 681 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 BBS2Q9BXC9 721 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 DUSP16Q9BY84 665 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 CNTNAP3Q9BZ76 1288 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 PLK2Q9NYY3 685 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 BCCIPQ9P287 314 aaKnown RBP eCLIP8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 DEC1Q9P2X7 70 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 NAGPAQ9UK23 515 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 PCDHA5Q9Y5H7 936 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 ABCA7Q8IZY2 2146 aa8.53□□□□□ -1.04
AC012494.1-201ENST00000439259 MYH10P35580 1976 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 TCRBV21S2A2A0A5A6 115 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 BCLAF3A2AJT9 711 aaKnown RBP8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 GOLGA6L4A6NEF3 574 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 PRRT4C9JH25 899 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 RHOBTB1O94844 696 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 CAVIN2O95810 425 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 CALCAP01258 141 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 KLKB1P03952 638 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 TYRP14679 529 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 GTF2H1P32780 548 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 TNFRSF4P43489 277 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 DHPSP49366 369 aaPredicted RBP8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 ENPEPQ07075 957 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 KCNMA1Q12791 1236 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 EFEMP1Q12805 493 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 ELF2Q15723 593 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 SKOR2Q2VWA4 1001 aaPredicted RBP8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 STPG1Q5TH74 334 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 EGFLAMQ63HQ2 1017 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 TMEFF1Q8IYR6 380 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 PGBD3Q8N328 593 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 DEFB119Q8N690 84 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 ZNF513Q8N8E2 541 aaPredicted RBP8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 TERB1Q8NA31 727 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 CCDC26Q8TAB7 109 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 OLIG1Q8TAK6 271 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 SMARCE1Q969G3 411 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 PNPLA8Q9NP80 782 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 VPS45Q9NRW7 570 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 DNAJC17Q9NVM6 304 aaKnown RBP8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 RMND1Q9NWS8 449 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 MBD1Q9UIS9 605 aaPredicted RBP8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 RASAL2Q9UJF2 1139 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 PCDHGA5Q9Y5G8 931 aa8.52□□□□□ -1.05
AC012494.1-201ENST00000439259 USP3Q9Y6I4 520 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms