RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SNAP47Q5SQN1 464 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 NPAS4Q8IUM7 802 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 SEMA6BQ9H3T3 888 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 CFAP97Q9P2B7 532 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 GULP1Q9UBP9 304 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 RPS6KB2Q9UBS0 482 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 DRG1Q9Y295 367 aaKnown RBP12.44□□□□□ -0.42
NEK1-201ENST00000439128 A0A1W2PQJ5 194 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 B4GALT5O43286 388 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 CHI3L1P36222 383 aaPredicted RBP12.44□□□□□ -0.42
NEK1-201ENST00000439128 GPR1P46091 355 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 GRAMD1BQ3KR37 738 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 MROH9Q5TGP6 573 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 TATDN1Q6P1N9 297 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 SLC44A2Q8IWA5 706 aaPredicted RBP12.44□□□□□ -0.42
NEK1-201ENST00000439128 ABRAQ8N0Z2 381 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 BTN2A2Q8WVV5 523 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 PIK3R5Q8WYR1 880 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 LENG9Q96B70 501 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 ATP9AO75110 1047 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 CYP2A7P20853 494 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 TFDP3Q5H9I0 405 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 AGAP9Q5VTM2 703 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 TTC7BQ86TV6 843 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 GPR20Q99678 358 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 C17orf80Q9BSJ5 609 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 CDT1Q9H211 546 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 NXF3Q9H4D5 531 aaKnown RBP12.44□□□□□ -0.42
NEK1-201ENST00000439128 RIPK3Q9Y572 518 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 KRT87PA6NCN2 255 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 F8VP50 259 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 GYG2O15488 501 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 PLA2G4AP47712 749 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 PSEN1P49768 467 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 ZC3H12AQ5D1E8 599 aaKnown RBP12.44□□□□□ -0.42
NEK1-201ENST00000439128 BEND6Q5SZJ8 279 aaPredicted RBP12.44□□□□□ -0.42
NEK1-201ENST00000439128 TTC39BQ5VTQ0 682 aaPredicted RBP12.44□□□□□ -0.42
NEK1-201ENST00000439128 FBXW10Q5XX13 1052 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 ZNF606Q8WXB4 792 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 ZNF536O15090 1300 aa12.44□□□□□ -0.42
NEK1-201ENST00000439128 KANSL1LA0AUZ9 987 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 CYTH3O43739 400 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 FXR1P51114 621 aaKnown RBP eCLIP12.43□□□□□ -0.42
NEK1-201ENST00000439128 SLC6A3Q01959 620 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 CUL3Q13618 768 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 HSDL1Q3SXM5 330 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 HJURPQ8NCD3 748 aaPredicted RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 ZFYVE19Q96K21 471 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 ACO2Q99798 780 aaKnown RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 RASSF4Q9H2L5 321 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 GGT7Q9UJ14 662 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 PTCH2Q9Y6C5 1203 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 GNG14A0A1W2PPG7 69 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 FOXP2O15409 715 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 CYP7B1O75881 506 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 GUCA1CO95843 209 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 ITGA8P53708 1063 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 OTUD4Q01804 1114 aaKnown RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 TUSC3Q13454 348 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 GRAMD4Q6IC98 578 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 OTOAQ7RTW8 1153 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 FAM167BQ9BTA0 163 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 STK39Q9UEW8 545 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 MRFAP1Q9Y605 127 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 COL1A2P08123 1366 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 F8W810 466 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 HSPA1AP0DMV8 641 aaKnown RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 HSPA1BP0DMV9 641 aaKnown RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 NPR3P17342 541 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 OR8D1Q8WZ84 308 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 C18orf25Q96B23 403 aaPredicted RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 PSMC3IPQ9P2W1 217 aaPredicted RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 SEPT3Q9UH03 358 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 O00370 1275 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 HAUS5O94927 633 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 PAEPP09466 180 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 BLVRAP53004 296 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 ACLYP53396 1101 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 NR1I3Q14994 352 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 TDRD5Q8NAT2 981 aaKnown RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 B4GALNT2Q8NHY0 566 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 CEP19Q96LK0 163 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 KIF2CQ99661 725 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 TM6SF2Q9BZW4 377 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 NDEL1Q9GZM8 345 aa12.43□□□□□ -0.42
NEK1-201ENST00000439128 RRAGDQ9NQL2 400 aaPredicted RBP12.43□□□□□ -0.42
NEK1-201ENST00000439128 RNF103-CHMP3A0A140T963 221 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 MYO1GB0I1T2 1018 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 SPAG6O75602 509 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 PSMD10O75832 226 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 ALDH18A1P54886 795 aaKnown RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 MYBPC2Q14324 1141 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 POU6F1Q14863 301 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 EFL1Q7Z2Z2 1120 aaKnown RBP12.42□□□□□ -0.42
NEK1-201ENST00000439128 COLGALT1Q8NBJ5 622 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 B3GALNT2Q8NCR0 500 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 CXorf38Q8TB03 319 aa12.42□□□□□ -0.42
NEK1-201ENST00000439128 GPN3Q9UHW5 284 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms