RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PMPCBO75439 489 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 OFD1O75665 1012 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 MT-CO3P00414 261 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 CBSLP0DN79 551 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 PF4V1P10720 104 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 PRF1P14222 555 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 HOXD9P28356 352 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 GKP32189 559 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 CBSP35520 551 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 NEK2P51955 445 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 LINC00205P59089 165 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 SUMO2P61956 95 aaKnown RBP3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 ERVK-7P63135 1459 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 MLC1Q15049 377 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 TWIST1Q15672 202 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 TRIM71Q2Q1W2 868 aaKnown RBP3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 C4orf46Q504U0 113 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 PLA1AQ53H76 456 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 C10orf25Q5T742 122 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 IFIT1BQ5T764 474 aaKnown RBP3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 ZNF783Q6ZMS7 281 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 DGLUCYQ7Z3D6 616 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 TIAM2Q8IVF5 1701 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 OSR1Q8TAX0 266 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 ZNF398Q8TD17 642 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 NSMCE1Q8WV22 266 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 CDX2Q99626 313 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 C17orf80Q9BSJ5 609 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 MS4A7Q9GZW8 240 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 GBA2Q9HCG7 927 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 ZSCAN32Q9NX65 697 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 SAGE1Q9NXZ1 904 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 IP6K2Q9UHH9 426 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 AKAP11Q9UKA4 1901 aa3.57□□□□□ -1.84
HMGB1P18-201ENST00000438801 FAM186AA6NE01 2351 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 COL14A1Q05707 1796 aaKnown RBP3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 COL15A1P39059 1388 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 POLQO75417 2590 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 LY6G6EA0A0G2JKS1 128 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 BTN3A1O00481 513 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 RNF8O76064 485 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 FOSL2P15408 326 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 PHKG2P15735 406 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 NPR1P16066 1061 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 SCP2P22307 547 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 CCKARP32238 428 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 ARFIP2P53365 341 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 RIPPLY3P57055 190 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 HTRA4P83105 476 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 CTBP1Q13363 440 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 CCNIQ14094 377 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 ZNF267Q14586 743 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 PTCHD3Q3KNS1 767 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 LRIT3Q3SXY7 679 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 CERCAMQ5T4B2 595 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 PTCHD4Q6ZW05 846 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 PNISRQ8TF01 805 aaKnown RBP3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 DIS3LQ8TF46 1054 aaKnown RBP3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 KBTBD7Q8WVZ9 684 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 RAPGEF4Q8WZA2 1011 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 VCPIP1Q96JH7 1222 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 ADGRE3Q9BY15 652 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 TRIM54Q9BYV2 358 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 SLC12A5Q9H2X9 1139 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 AASDHPPTQ9NRN7 309 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 PI4KBQ9UBF8 816 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 ASPMQ8IZT6 3477 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 ITSN1Q15811 1721 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 KNDC1Q76NI1 1749 aa3.56□□□□□ -1.84
HMGB1P18-201ENST00000438801 PIK3C2BO00750 1634 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 SPTBN2O15020 2390 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 BRD4O60885 1362 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 SPAG9O60271 1321 aaKnown RBP3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 TTC21AQ8NDW8 1320 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 IGKV2D-30A0A075B6S6 120 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 AP1G1O43747 822 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 NCLP19338 710 aaKnown RBP3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 HTR1BP28222 390 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 COPB1P53618 953 aaKnown RBP3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 ZNF91Q05481 1191 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 LMAN2Q12907 356 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 DAAM2Q86T65 1068 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 RAB11FIP4Q86YS3 637 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 DENND1CQ8IV53 801 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 SPARTQ8N0X7 666 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 MPP5Q8N3R9 675 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 OR6B3Q8NGW1 331 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 MAP4K1Q92918 833 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 HOOK2Q96ED9 719 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 NT5C1BQ96P26 610 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 SIGLEC11Q96RL6 698 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 DPH1Q9BZG8 443 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 FOXP1Q9H334 677 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 LPAR3Q9UBY5 353 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 DRG1Q9Y295 367 aaKnown RBP3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 ARFGEF1Q9Y6D6 1849 aa3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 SCN11AQ9UI33 1791 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms