RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 LACRTQ9GZZ8 138 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 SLC12A6Q9UHW9 1150 aa19.15■□□□□ 0.66
HDAC6-208ENST00000438518 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.15■□□□□ 0.66
HDAC6-208ENST00000438518 KIF26AQ9ULI4 1882 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-208ENST00000438518 E2F8A0AVK6 867 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 MDM4O15151 490 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 ECI2O75521 394 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 PROSCO94903 275 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 CXCR3P49682 368 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 ATP11AP98196 1134 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 TFF2Q03403 129 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 ZNF252P-AS1Q0IIN9 211 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 ZNF77Q15935 545 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 ARL13BQ3SXY8 428 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 OTUD1Q5VV17 481 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-208ENST00000438518 C11orf63Q6NUN7 778 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 DEPDC1BQ8WUY9 529 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 SH3BP1Q9Y3L3 701 aa19.14■□□□□ 0.65
HDAC6-208ENST00000438518 LEFTY2O00292 366 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 SLC9A3R1O14745 358 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-208ENST00000438518 STC2O76061 302 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 PRAMEF12O95522 483 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 IL9P15248 144 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 FCARP24071 287 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 NAP1L1P55209 391 aaKnown RBP19.13■□□□□ 0.65
HDAC6-208ENST00000438518 HDAC4P56524 1084 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 PITX1P78337 314 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-208ENST00000438518 NME3Q13232 169 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 CDO1Q16878 200 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 C15orf59Q2T9L4 293 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-208ENST00000438518 HTR3DQ70Z44 454 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 SYCE1Q8N0S2 351 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 ATP6V0D2Q8N8Y2 350 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 ADAM32Q8TC27 787 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 BPIFB1Q8TDL5 484 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 SH3RF2Q8TEC5 729 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 RNF34Q969K3 372 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 NTAN1Q96AB6 310 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 OTUB2Q96DC9 234 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 IRX2Q9BZI1 471 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-208ENST00000438518 WDCPQ9H6R7 721 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 KCND1Q9NSA2 647 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 PIGVQ9NUD9 493 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 SMPD4Q9NXE4 827 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 IGSF9Q9P2J2 1179 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 TBC1D14Q9P2M4 693 aa19.13■□□□□ 0.65
HDAC6-208ENST00000438518 C2CD4DB7Z1M9 353 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 ANHXE9PGG2 379 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 MSI1O43347 362 aaKnown RBP19.12■□□□□ 0.65
HDAC6-208ENST00000438518 SLC11A2P49281 568 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 HADHQ16836 314 aaKnown RBP19.12■□□□□ 0.65
HDAC6-208ENST00000438518 POTEHQ6S545 545 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 PSTKQ8IV42 348 aaKnown RBP19.12■□□□□ 0.65
HDAC6-208ENST00000438518 ADHFE1Q8IWW8 467 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 TPCN2Q8NHX9 752 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 BTN2A3PQ96KV6 586 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 FCRL2Q96LA5 508 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-208ENST00000438518 DDX50Q9BQ39 737 aaKnown RBP19.12■□□□□ 0.65
HDAC6-208ENST00000438518 TRIM7Q9C029 511 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 PRDM6Q9NQX0 595 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 THG1LQ9NWX6 298 aaKnown RBP19.12■□□□□ 0.65
HDAC6-208ENST00000438518 ARHGEF38Q9NXL2 777 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 TFR2Q9UP52 801 aa19.12■□□□□ 0.65
HDAC6-208ENST00000438518 LRCH4O75427 683 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 ZXDBP98169 803 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 FCHO2Q0JRZ9 810 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 SCAPQ12770 1279 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 HTR4Q13639 388 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 MESDQ14696 234 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 CC2D1AQ6P1N0 951 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-208ENST00000438518 MFSD6LQ8IWD5 586 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 ADAMTS19Q8TE59 1207 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 ALS2CR12Q96Q35 445 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 ADAM33Q9BZ11 813 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 GKN1Q9NS71 199 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 CALCOCO1Q9P1Z2 691 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 CFAP97Q9P2B7 532 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 SALL4Q9UJQ4 1053 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 STOML2Q9UJZ1 356 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 CCL26Q9Y258 94 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 DUSP10Q9Y6W6 482 aa19.11■□□□□ 0.65
HDAC6-208ENST00000438518 SYNJ2BP-COX16A0A087WUM0 186 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 MACROD2A1Z1Q3 448 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 HEPACAM2A8MVW5 462 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 KCNU1A8MYU2 1149 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 LOC730098B7Z3J9 87 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 BUB1O43683 1085 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 PRPSAP2O60256 369 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 BUB1BO60566 1050 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-208ENST00000438518 PSMC3P17980 439 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 TFE3P19532 575 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-208ENST00000438518 CORO1AP31146 461 aaKnown RBP19.1■□□□□ 0.65
HDAC6-208ENST00000438518 CHKAP35790 457 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 ZC3H12AQ5D1E8 599 aaKnown RBP19.1■□□□□ 0.65
HDAC6-208ENST00000438518 Q6ZNB5 142 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 POLNQ7Z5Q5 900 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 BTBD6Q96KE9 485 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 RPGRIP1Q96KN7 1286 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 HAPLN3Q96S86 360 aa19.1■□□□□ 0.65
HDAC6-208ENST00000438518 TKTL2Q9H0I9 626 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms