RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 GJB4Q9NTQ9 266 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 FOXJ2Q9P0K8 574 aa11.8□□□□□ -0.52
RTN4-211ENST00000438462 TDRD6O60522 2096 aaKnown RBP11.79□□□□□ -0.52
RTN4-211ENST00000438462 CPED1A4D0V7 1026 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 CNTN5O94779 1100 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 IRF1P10914 325 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 PROZP22891 400 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 GALCP54803 685 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 RPS14P62263 151 aaKnown RBP11.79□□□□□ -0.52
RTN4-211ENST00000438462 EIF3IQ13347 325 aaKnown RBP11.79□□□□□ -0.52
RTN4-211ENST00000438462 CAMK2GQ13555 558 aaPredicted RBP11.79□□□□□ -0.52
RTN4-211ENST00000438462 PDIA5Q14554 519 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 PPP2R5AQ15172 486 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 SP5Q6BEB4 398 aaPredicted RBP11.79□□□□□ -0.52
RTN4-211ENST00000438462 UCMAQ8WVF2 138 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 PREBQ9HCU5 417 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 NLGN3Q9NZ94 848 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 MARK1Q9P0L2 795 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
RTN4-211ENST00000438462 SLC5A6Q9Y289 635 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.79□□□□□ -0.52
RTN4-211ENST00000438462 SNX14Q9Y5W7 946 aa11.79□□□□□ -0.52
RTN4-211ENST00000438462 ZNF469Q96JG9 3925 aaPredicted RBP11.78□□□□□ -0.52
RTN4-211ENST00000438462 K7ERI5 159 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 JMJD7P0C870 316 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 CDC27P30260 824 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 DRAP1Q14919 205 aaPredicted RBP11.78□□□□□ -0.52
RTN4-211ENST00000438462 C9orf57Q5W0N0 161 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 B3GNT8Q7Z7M8 397 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 DSG4Q86SJ6 1040 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 ZNF366Q8N895 744 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 MFSD2AQ8NA29 543 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 TPCN2Q8NHX9 752 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 SORCS1Q8WY21 1168 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 DUSP9Q99956 384 aaKnown RBP11.78□□□□□ -0.52
RTN4-211ENST00000438462 MRPL4Q9BYD3 311 aaKnown RBP11.78□□□□□ -0.52
RTN4-211ENST00000438462 PLK2Q9NYY3 685 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 WDR35Q9P2L0 1181 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 MAP4K5Q9Y4K4 846 aa11.78□□□□□ -0.52
RTN4-211ENST00000438462 TTC26A0AVF1 554 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 HEATR9A2RTY3 570 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 TMEM200CA6NKL6 621 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 GOLGA8AA7E2F4 631 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 GOLGA8BA8MQT2 603 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 XPOTO43592 962 aaKnown RBP11.77□□□□□ -0.53
RTN4-211ENST00000438462 C7P10643 843 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 ITIH1P19827 911 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 ACAT1P24752 427 aaKnown RBP11.77□□□□□ -0.53
RTN4-211ENST00000438462 HARS2P49590 506 aaKnown RBP11.77□□□□□ -0.53
RTN4-211ENST00000438462 MFAP3P55082 362 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 ZBTB16Q05516 673 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 SPIDRQ14159 915 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 CFAP221Q4G0U5 840 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 DENND5BQ6ZUT9 1274 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 CXXC5Q7LFL8 322 aaKnown RBP11.77□□□□□ -0.53
RTN4-211ENST00000438462 XYLT1Q86Y38 959 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 SPATA2LQ8IUW3 424 aaPredicted RBP11.77□□□□□ -0.53
RTN4-211ENST00000438462 GANCQ8TET4 914 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 HAS1Q92839 578 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 ZBTB45Q96K62 511 aaPredicted RBP11.77□□□□□ -0.53
RTN4-211ENST00000438462 VPS54Q9P1Q0 977 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 SERGEFQ9UGK8 458 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 KCND3Q9UK17 655 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 DCHS2Q6V1P9 2916 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 FN1P02751 2386 aaKnown RBP11.77□□□□□ -0.53
RTN4-211ENST00000438462 RP1P56715 2156 aa11.77□□□□□ -0.53
RTN4-211ENST00000438462 A0A1W2PQ27 194 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 A0A1W2PQ64 194 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 A0A1W2PQC6 194 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 K7ESM1 405 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 ZBTB43O43298 467 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 COCHO43405 550 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 LIFP15018 202 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 PAX3P23760 479 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 PPP3CCP48454 512 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 TRAPPC10P48553 1259 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 PPP2R3AQ06190 1150 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 SEPT6Q14141 434 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 DHX8Q14562 1220 aaKnown RBP11.76□□□□□ -0.53
RTN4-211ENST00000438462 INTS6LQ5JSJ4 861 aaKnown RBP11.76□□□□□ -0.53
RTN4-211ENST00000438462 PERM1Q5SV97 790 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 NAPEPLDQ6IQ20 393 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 ASB18Q6ZVZ8 466 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 APOBEC4Q8WW27 367 aaKnown RBP11.76□□□□□ -0.53
RTN4-211ENST00000438462 IFT74Q96LB3 600 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 PKMYT1Q99640 499 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 HSD17B14Q9BPX1 270 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 TTLL2Q9BWV7 592 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 C22orf23Q9BZE7 217 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 PLEKHA5Q9HAU0 1116 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 POLD4Q9HCU8 107 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 LATS2Q9NRM7 1088 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 GTF3C4Q9UKN8 822 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 NCKAP1Q9Y2A7 1128 aa11.76□□□□□ -0.53
RTN4-211ENST00000438462 LRRC72A6NJI9 287 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 ZNF891A8MT65 544 aaPredicted RBP11.75□□□□□ -0.53
RTN4-211ENST00000438462 PIRO00625 290 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 MAGEC1O60732 1142 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms