RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 ZNF33AQ06730 810 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 BST2Q10589 180 aaKnown RBP13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 LMAN2Q12907 356 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 SPDYCQ5MJ68 293 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 PM20D1Q6GTS8 502 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 KLHL10Q6JEL2 608 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 CACUL1Q86Y37 369 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 FMNL3Q8IVF7 1028 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 UBR7Q8N806 425 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 OR2I1PQ8NGU4 316 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 SORCS1Q8WY21 1168 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 KAT5Q92993 513 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 HSPA12BQ96MM6 686 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 IPO9Q96P70 1041 aaKnown RBP13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 GTPBP2Q9BX10 602 aaKnown RBP13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 DCLK3Q9C098 648 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 HESX1Q9UBX0 185 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 SFMBT1Q9UHJ3 866 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 ZNF510Q9Y2H8 683 aa13.71□□□□□ -0.21
CDCA4P4-201ENST00000435216 USP24Q9UPU5 2620 aa13.71□□□□□ -0.22
CDCA4P4-201ENST00000435216 PI4KAP42356 2102 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 YJEFN3A6XGL0 299 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 E7ENQ6 273 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 O00370 1275 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 MSI1O43347 362 aaKnown RBP13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 LCP1P13796 627 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 FMO5P49326 533 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 RGS7P49802 495 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 LRRC63Q05C16 580 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 FOXC1Q12948 553 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 FUT11Q495W5 492 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 PEAR1Q5VY43 1037 aaPredicted RBP13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 BSPRYQ5W0U4 402 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 SLC23A3Q6PIS1 610 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 TMEM270Q6UE05 265 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 SLC36A4Q6YBV0 504 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 SIX6OS1Q8N1H7 587 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 TRIML1Q8N9V2 468 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 DDI1Q8WTU0 396 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 TFAP2BQ92481 460 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 PIWIL1Q96J94 861 aaKnown RBP13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 CIPCQ9C0C6 399 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 MKRN2Q9H000 416 aaKnown RBP13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 MAN1B1Q9UKM7 699 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 SLC27A6Q9Y2P4 619 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 ZFHX4Q86UP3 3567 aa13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 ASCC3Q8N3C0 2202 aaKnown RBP13.7□□□□□ -0.22
CDCA4P4-201ENST00000435216 RNF225M0QZC1 329 aaPredicted RBP13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 GFRA2O00451 464 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 PSMA7O14818 248 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 ZNF217O75362 1048 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 GABBR2O75899 941 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 CYBBP04839 570 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 VDRP11473 427 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 MAOBP27338 520 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 YWHAEP62258 255 aaKnown RBP13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 TRIP4Q15650 581 aaPredicted RBP13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 CCDC40Q4G0X9 1142 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 TMEM215Q68D42 235 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 ANKS1BQ7Z6G8 1248 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 RGL4Q8IZJ4 473 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 RNF139Q8WU17 664 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 PLD4Q96BZ4 506 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 ZSWIM1Q9BR11 485 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 FAM124BQ9H5Z6 455 aaPredicted RBP13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 PRDM16Q9HAZ2 1276 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 ELOVL2Q9NXB9 296 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 THAP10Q9P2Z0 257 aaPredicted RBP13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 SLC6A14Q9UN76 642 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 PCDHB4Q9Y5E5 795 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 PCDH15Q96QU1 1955 aa13.69□□□□□ -0.22
CDCA4P4-201ENST00000435216 BIN1O00499 593 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 NDUFS2O75306 463 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 SERPINF2P08697 491 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 BMP6P22004 513 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 TBXAS1P24557 533 aaPredicted RBP13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 PRKCHP24723 683 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 BRD2P25440 801 aaKnown RBP13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 HOXD9P28356 352 aaPredicted RBP13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 HARS2P49590 506 aaKnown RBP13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 SGSHP51688 502 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 ATXN3P54252 364 aaPredicted RBP13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 DAOAP59103 153 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 NUCB2P80303 420 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 SHC2P98077 582 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 GFPT1Q06210 699 aaPredicted RBP13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 STIM1Q13586 685 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 BECN1Q14457 450 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 ZNF234Q14588 700 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 STARD3Q14849 445 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 DUOXA1Q1HG43 343 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 PKDCCQ504Y2 493 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 PMF1Q6P1K2 205 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 RRAGAQ7L523 313 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 ARHGEF19Q8IW93 802 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 FAM217AQ8IXS0 508 aa13.68□□□□□ -0.22
CDCA4P4-201ENST00000435216 PPM1KQ8N3J5 372 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms