RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 CDC6Q99741 560 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 DCLK3Q9C098 648 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 CIPCQ9C0C6 399 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 PNPLA8Q9NP80 782 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 DMAC2Q9NW81 257 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 ELOVL2Q9NXB9 296 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 FLRT2O43155 660 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 ASS1P00966 412 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 HLA-DRAP01903 254 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 EPHX1P07099 455 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 PRKCHP24723 683 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 CSNK1EP49674 416 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 PSEN1P49768 467 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 KIF11P52732 1056 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 COPAP53621 1224 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 ARID5AQ03989 594 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 EFEMP1Q12805 493 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 E2F5Q15329 346 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 CCDC186Q7Z3E2 898 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 ANKS1BQ7Z6G8 1248 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 TMC2Q8TDI7 906 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 SORCS1Q8WY21 1168 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 PIWIL1Q96J94 861 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 NT5C1AQ9BXI3 368 aa12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHRNA1-207ENST00000435083 FASNP49327 2511 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 DMXL2Q8TDJ6 3036 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 EIF4E1BA6NMX2 242 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 YEATS4O95619 227 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 IGLV3-19P01714 112 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 CD58P19256 250 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 CYP4F3Q08477 520 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 SUZ12Q15022 739 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 CCDC157Q569K6 752 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 CEP135Q66GS9 1140 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 SERPINA13PQ6UXR4 307 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 DENND1CQ8IV53 801 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 SLC9A9Q8IVB4 645 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 GRAMD1CQ8IYS0 662 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 ZNF276Q8N554 614 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 BAHD1Q8TBE0 780 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 DDI1Q8WTU0 396 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 INTS4Q96HW7 963 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 CDK5RAP1Q96SZ6 601 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 IMPG2Q9BZV3 1241 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 TOR4AQ9NXH8 423 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 CLIC5Q9NZA1 410 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 AGO1Q9UL18 857 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 CLEC4EQ9ULY5 219 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 BTBD3Q9Y2F9 522 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 PCDHGB2Q9Y5G2 931 aa12.17□□□□□ -0.46
CHRNA1-207ENST00000435083 TRABD2BA6NFA1 517 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 HLA-EP13747 358 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 AFF3P51826 1226 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 INCA1Q0VD86 236 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 STK4Q13043 487 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 EIF4HQ15056 248 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 FOXD4L5Q5VV16 416 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 DBX2Q6ZNG2 339 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 C1orf216Q8TAB5 229 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 FOXD4L4Q8WXT5 416 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 DUSP16Q9BY84 665 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 DNAI2Q9GZS0 605 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 C6orf106Q9H6K1 298 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 CYP3A43Q9HB55 503 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 FAM13BQ9NYF5 915 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 STRIP2Q9ULQ0 834 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 SNX11Q9Y5W9 270 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 SLCO1B1Q9Y6L6 691 aa12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 DSPP15924 2871 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-207ENST00000435083 SLC12A8A0AV02 714 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 FAM149AA5PLN7 773 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 KCNK3O14649 394 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 IKBKBO14920 756 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 TIMM44O43615 452 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 NR3C1P04150 777 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 ACSL1P33121 698 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 TEAD4Q15561 434 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 KIF19Q2TAC6 998 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 FNDC3BQ53EP0 1204 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 ZNF394Q53GI3 561 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 PPP1R26Q5T8A7 1209 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 TMEM215Q68D42 235 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 RSRC2Q7L4I2 434 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 CEP57L1Q8IYX8 460 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 GALNT15Q8N3T1 639 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 CPXM2Q8N436 756 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 KIAA0895Q8NCT3 520 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 OR2T3Q8NH03 318 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 BBC3Q96PG8 261 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 SLC2A11Q9BYW1 496 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 PCED1AQ9H1Q7 454 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 LHX5Q9H2C1 402 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 KCTD10Q9H3F6 313 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 APOBEC3GQ9HC16 384 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 SCUBE2Q9NQ36 999 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms