RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 PIWIL1Q96J94 861 aaKnown RBP18.69■□□□□ 0.58
CPNE1-213ENST00000434795 HSFY1Q96LI6 401 aa18.69■□□□□ 0.58
CPNE1-213ENST00000434795 GABRG3Q99928 467 aa18.69■□□□□ 0.58
CPNE1-213ENST00000434795 INTS2Q9H0H0 1204 aaKnown RBP18.69■□□□□ 0.58
CPNE1-213ENST00000434795 UBE2TQ9NPD8 197 aaPredicted RBP18.69■□□□□ 0.58
CPNE1-213ENST00000434795 HBS1LQ9Y450 684 aaKnown RBP18.69■□□□□ 0.58
CPNE1-213ENST00000434795 LAMA1P25391 3075 aa18.69■□□□□ 0.58
CPNE1-213ENST00000434795 RALGAPA1Q6GYQ0 2036 aa18.69■□□□□ 0.58
CPNE1-213ENST00000434795 WASH3PC4AMC7 463 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 GFRA2O00451 464 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 GPD2P43304 727 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 RPL34P49207 117 aaKnown RBP18.68■□□□□ 0.58
CPNE1-213ENST00000434795 MFAP3P55082 362 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 BYSLQ13895 437 aaKnown RBP18.68■□□□□ 0.58
CPNE1-213ENST00000434795 AASDHQ4L235 1098 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-213ENST00000434795 SDE2Q6IQ49 451 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 KIAA1211LQ6NV74 962 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 CHPFQ8IZ52 775 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 PGBD3Q8N328 593 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 IRGQQ8WZA9 623 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 BCCIPQ9P287 314 aaKnown RBP eCLIP18.68■□□□□ 0.585e-7■■■□□ 17.8
CPNE1-213ENST00000434795 STOML2Q9UJZ1 356 aa18.68■□□□□ 0.58
CPNE1-213ENST00000434795 PIK3R2O00459 728 aa18.67■□□□□ 0.58
CPNE1-213ENST00000434795 MAP3K13O43283 966 aa18.67■□□□□ 0.58
CPNE1-213ENST00000434795 HOXB2P14652 356 aa18.67■□□□□ 0.58
CPNE1-213ENST00000434795 HARS2P49590 506 aaKnown RBP18.67■□□□□ 0.58
CPNE1-213ENST00000434795 GEN1Q17RS7 908 aa18.67■□□□□ 0.58
CPNE1-213ENST00000434795 SCUBE3Q8IX30 993 aa18.67■□□□□ 0.58
CPNE1-213ENST00000434795 IPO4Q8TEX9 1081 aaKnown RBP18.67■□□□□ 0.58
CPNE1-213ENST00000434795 SLC2A11Q9BYW1 496 aa18.67■□□□□ 0.58
CPNE1-213ENST00000434795 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 M0QYV0 167 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 FYNP06241 537 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 SPDYCQ5MJ68 293 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 STPG1Q5TH74 334 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 TCEAL6Q6IPX3 200 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 MSANTD2Q6P1R3 559 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 LPCAT2Q7L5N7 544 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 TMEFF1Q8IYR6 380 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 MLKLQ8NB16 471 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 CLEC4CQ8WTT0 213 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 DDI1Q8WTU0 396 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 TCEAL3Q969E4 200 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 CACNA2D2Q9NY47 1150 aa18.66■□□□□ 0.58
CPNE1-213ENST00000434795 THAP10Q9P2Z0 257 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-213ENST00000434795 TIMM44O43615 452 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 FBXO21O94952 628 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 CYBBP04839 570 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 SLC9A1P19634 815 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 PTGER3P43115 390 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 DHPSP49366 369 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-213ENST00000434795 ENPP2Q13822 863 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 MPPE1Q53F39 396 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 ADGRF1Q5T601 910 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 TMEM215Q68D42 235 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 DENND1BQ6P3S1 775 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 CREBRFQ8IUR6 639 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 ZNF606Q8WXB4 792 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 TMA16Q96EY4 203 aaKnown RBP18.65■□□□□ 0.58
CPNE1-213ENST00000434795 ELOVL2Q9NXB9 296 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 RAD54BQ9Y620 910 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 STON1Q9Y6Q2 735 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 GON4LQ3T8J9 2241 aa18.65■□□□□ 0.58
CPNE1-213ENST00000434795 NPC1O15118 1278 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 MSI1O43347 362 aaKnown RBP18.64■□□□□ 0.57
CPNE1-213ENST00000434795 TSPAN3O60637 253 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 IGLV3-27P01718 113 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 LTFP02788 710 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 KRT5P13647 590 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 GJB7Q6PEY0 223 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 TRIM65Q6PJ69 517 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 ENOSF1Q7L5Y1 443 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 STK32AQ8WU08 396 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 PIGKQ92643 395 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 AZIN2Q96A70 460 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 ERLEC1Q96DZ1 483 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 SPACA7Q96KW9 195 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 SLC4A5Q9BY07 1137 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 MIS12Q9H081 205 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 ACP6Q9NPH0 428 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 TMEM74BQ9NUR3 256 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 CALCOCO1Q9P1Z2 691 aa18.64■□□□□ 0.57
CPNE1-213ENST00000434795 CNOT1A5YKK6 2376 aaKnown RBP18.63■□□□□ 0.57
CPNE1-213ENST00000434795 PATE3B3GLJ2 98 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 KHNYNO15037 678 aaKnown RBP18.63■□□□□ 0.57
CPNE1-213ENST00000434795 ZBTB24O43167 697 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-213ENST00000434795 LATS1O95835 1130 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 NDUFV2P19404 249 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 HOXD9P28356 352 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-213ENST00000434795 IRX4P78413 519 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 APBA1Q02410 837 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 IL31Q6EBC2 164 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 CYP2U1Q7Z449 544 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 TMEM110Q86TL2 294 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 MRGPRX1Q96LB2 322 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 CLSTN2Q9H4D0 955 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 CYTH4Q9UIA0 394 aa18.63■□□□□ 0.57
CPNE1-213ENST00000434795 IGHV1OR15-9A0A0B4J2B8 117 aa18.62■□□□□ 0.57
CPNE1-213ENST00000434795 GOLGA6L7A0A1B0GV03 622 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms