RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 VIPP01282 170 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 HARSP12081 509 aaKnown RBP3.91□□□□□ -1.78
CLK1-204ENST00000432425 EGR1P18146 543 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 GABRB3P28472 473 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 POLGP54098 1239 aaPredicted RBP3.91□□□□□ -1.78
CLK1-204ENST00000432425 ATP1A4Q13733 1029 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 SLC5A9Q2M3M2 681 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 TRIM71Q2Q1W2 868 aaKnown RBP3.91□□□□□ -1.78
CLK1-204ENST00000432425 ARHGAP15Q53QZ3 475 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 FAM90A2PQ658T7 463 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 RAP1GAP2Q684P5 730 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 AWAT2Q6E213 333 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 FBXO38Q6PIJ6 1188 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 KSR2Q6VAB6 950 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 UBE2Q1Q7Z7E8 422 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 DPP9Q86TI2 863 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 UEVLDQ8IX04 471 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 CLASRPQ8N2M8 674 aaKnown RBP3.91□□□□□ -1.78
CLK1-204ENST00000432425 OVCA2Q8WZ82 227 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 PIGKQ92643 395 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 AKAP1Q92667 903 aaKnown RBP eCLIP3.91□□□□□ -1.78
CLK1-204ENST00000432425 PMM1Q92871 262 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 SENP7Q9BQF6 1050 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 TRMOQ9BU70 441 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 TM2D2Q9BX73 214 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 NAA15Q9BXJ9 866 aaKnown RBP3.91□□□□□ -1.78
CLK1-204ENST00000432425 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.91□□□□□ -1.783e-11■□□□□ 10.1
CLK1-204ENST00000432425 FOXP1Q9H334 677 aaPredicted RBP3.91□□□□□ -1.78
CLK1-204ENST00000432425 ASNSD1Q9NWL6 643 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 CEP83Q9Y592 693 aa3.91□□□□□ -1.78
CLK1-204ENST00000432425 C2CD4BA6NLJ0 364 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 CNOT3O75175 753 aaKnown RBP3.9□□□□□ -1.78
CLK1-204ENST00000432425 NBPF7P0C2Y1 421 aaPredicted RBP3.9□□□□□ -1.78
CLK1-204ENST00000432425 PECAM1P16284 738 aaPredicted RBP3.9□□□□□ -1.78
CLK1-204ENST00000432425 SCP2P22307 547 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 TNFSF4P23510 183 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 MTA1Q13330 715 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 LONRF1Q17RB8 773 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 FAM209BQ5JX69 171 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 CCDC144NLQ6NUI1 221 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 HIBCHQ6NVY1 386 aaPredicted RBP3.9□□□□□ -1.78
CLK1-204ENST00000432425 TECPR1Q7Z6L1 1165 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 TTC30AQ86WT1 665 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.9□□□□□ -1.78
CLK1-204ENST00000432425 C9orf106Q8NAJ2 232 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 ZFYVE19Q96K21 471 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 SCNM1Q9BWG6 230 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 RXFP3Q9NSD7 469 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 RGL1Q9NZL6 768 aa3.9□□□□□ -1.78
CLK1-204ENST00000432425 LY6G6EA0A0G2JKS1 128 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 FAM234BA2RU67 622 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 OR2W5A6NFC9 320 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 SRGAP2BP0DMP2 458 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 ITGB6P18564 788 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 RPS6KB1P23443 525 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 NDUFS1P28331 727 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 ME1P48163 572 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 SLC12A2P55011 1212 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 NSUN2Q08J23 767 aaKnown RBP eCLIP3.9□□□□□ -1.79
CLK1-204ENST00000432425 MAPK7Q13164 816 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 TWIST1Q15672 202 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 SLC35G1Q2M3R5 365 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 HSP90AB2PQ58FF8 381 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 RBM44Q6ZP01 1051 aaKnown RBP3.9□□□□□ -1.79
CLK1-204ENST00000432425 KRT27Q7Z3Y8 459 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 IRF2BP2Q7Z5L9 587 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 ARFGAP1Q8N6T3 406 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 OR52L2PQ8NGH6 319 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 ZNF566Q969W8 418 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 TRMT61AQ96FX7 289 aaKnown RBP3.9□□□□□ -1.79
CLK1-204ENST00000432425 RIPOR3Q96MK2 946 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 NUDT22Q9BRQ3 303 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 TRIM2Q9C040 744 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 POT1Q9NUX5 634 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 GEMIN8Q9NWZ8 242 aaKnown RBP3.9□□□□□ -1.79
CLK1-204ENST00000432425 HEY2Q9UBP5 337 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 HS3ST3B1Q9Y662 390 aa3.9□□□□□ -1.79
CLK1-204ENST00000432425 ANO9A1A5B4 782 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 C16orf96A6NNT2 1141 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 RASA4BC9J798 803 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 PROB1E7EW31 1015 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 RASA4O43374 803 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 NCK2O43639 380 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 KRT18P05783 430 aaKnown RBP3.89□□□□□ -1.79
CLK1-204ENST00000432425 SLC8A1P32418 973 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 HOXD12P35452 270 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 GNALP38405 381 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 CBFBQ13951 182 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 ELF2Q15723 593 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 MAPKAPK3Q16644 382 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 GLE1Q53GS7 698 aaKnown RBP3.89□□□□□ -1.79
CLK1-204ENST00000432425 EARS2Q5JPH6 523 aaKnown RBP3.89□□□□□ -1.79
CLK1-204ENST00000432425 ACSM6Q6P461 480 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 FAM57BQ71RH2 274 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 TFAP2DQ7Z6R9 452 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 RASGRP3Q8IV61 690 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 GLIS1Q8NBF1 620 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 MPLKIPQ8TAP9 179 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 BCAS4Q8TDM0 211 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 BRI3BPQ8WY22 251 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms